| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0544 |
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| Symbol | |
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| ID | 5108168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 582574 |
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| End bp | 583194 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640501757 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_001186046 |
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| Protein GI | 146305581 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTA AGAGTTCCTT GGACGGCCTG CGCAGTGTCG ATCTCAATGA TCTTGATCTG
AATAATGTTG GGTCGTGGCC TGCAGCGGTG AAATTCATAG CCGGTCTGCT TGTGCTCGTT
ATCGTCTTGG TGTTGGGCTA CAACTTTCAC CTGAAAGATC TGCAAAACAT GTTGGAGCAG
CGTCAGCGAG AAGAAGCAAC ACTAAAAGAG CAGTTCACCA GCAAGGCTTT TCAGGCGGCG
AACCTGGAAG CCTATAAAGA GCAAATGCAG GAGATGGAGG TGTCATTCGG CGCTCTCCTC
CGTCAGTTGC CAAGTGATAC CGAGGTTCCG GGGCTGCTGG AAGACATTAC CCGCACGGGC
TTGGGCAGTG GTCTGGAATT TGAAGAAATC AAGCTGTTGC CGGAAGTGGC TCAGCAGTTC
TATATCGAGT TGCCGATCCA GATCAAGGTC ACTGGCGGAT ATCACGATCT GGCAACCTTT
GTCAGCGGTG TGGCCAGTTT GCCTCGTATT GTCACCTTGC ATGATTTCCA ATTGGCGCCT
GCTAGTACTG AAAGCTCCAG CCGCTTGAAT ATGCAAATTA TGGCCAAGAC CTATCGCTAC
AATGATAAGG GGGCTCAATG A
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| Protein sequence | MSIKSSLDGL RSVDLNDLDL NNVGSWPAAV KFIAGLLVLV IVLVLGYNFH LKDLQNMLEQ
RQREEATLKE QFTSKAFQAA NLEAYKEQMQ EMEVSFGALL RQLPSDTEVP GLLEDITRTG
LGSGLEFEEI KLLPEVAQQF YIELPIQIKV TGGYHDLATF VSGVASLPRI VTLHDFQLAP
ASTESSSRLN MQIMAKTYRY NDKGAQ
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