| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0543 |
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| Symbol | |
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| ID | 5108167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 582005 |
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| End bp | 582577 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640501756 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001186045 |
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| Protein GI | 146305580 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGGA TTAACCTACT TCCCTGGCGT GAACAGCTGC GCGAGGAGCG CAAGCAGCGG
TTTCTGGTAA GTCTTGTCGG TGTGCTTGTC ATTGCGGCAG GCTTAGTTTT CCTCGCTGAT
CAATTTCTCA ATGCTGCGAT CAGCAATCAG AACGCACGGA ATAATTTCAT CAAGAAAGAA
ATCGCCGTGC TCGATGCGCG CATCAAGGAA ATTAGTGAGC TGAAGACGCG CCGGCAGCAG
TTGTTGGAGC GTATGAAGAT TATTCAAGAC TTGCAGGGCA ATCGGCCAAT TATTGGACGC
GTATTCGATC AGTTGGTTAG AACATTGCCG GATGGCGTTT ATTTCACCAA CGTCAAAATG
ACTGGTAAGA GCATTGCTAT TGTCGGCGCT GCCGAGTCGA ACAATCGGGT CTCGAACCTG
ATGCGTAATC TGGATGGTTC CGACTGGCTG GCGGCGCCTA ATTTGACTGA AGTCAAAGCG
GTTACGGCGG GGGCTTTGGA TCAGGCGAAC GTGTTCCAAT TGACCGTTCA GCAGACTCAG
CCTGACCAAG GGAAAGCGGA GGCAGCGCAA TGA
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| Protein sequence | MARINLLPWR EQLREERKQR FLVSLVGVLV IAAGLVFLAD QFLNAAISNQ NARNNFIKKE
IAVLDARIKE ISELKTRRQQ LLERMKIIQD LQGNRPIIGR VFDQLVRTLP DGVYFTNVKM
TGKSIAIVGA AESNNRVSNL MRNLDGSDWL AAPNLTEVKA VTAGALDQAN VFQLTVQQTQ
PDQGKAEAAQ
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