| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0533 |
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| Symbol | |
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| ID | 5108157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 568848 |
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| End bp | 569378 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501746 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001186035 |
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| Protein GI | 146305570 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCACCA TCGTTTCAGT ACGCCGCCAC GGCAAGGTCG TGATGGCTGG CGACGGCCAG
GTATCCCTCG GCAACACCGT GATGAAAGGC AACGCCAAGA AGGTCCGGCG CCTGTACCAC
GGCCAGGTGC TGGCCGGCTT CGCCGGTGCC ACCGCCGACG CCTTCACCCT GTTCGAACGC
TTCGAGGGCC AGCTGGAGAA ACACCAGGGC CACCTGGTGC GCGCTGCCGT CGAGCTGGCC
AAGGACTGGC GCACCGACCG CAGCCTGAGC CGCCTGGAAG CCATGCTGGC AGTGGCCAAC
AAGGACGCCT CACTGATCAT CACCGGCAAT GGCGACGTCG TCGAACCCGA GGAAGGCCTG
ATCGCCATGG GCTCCGGCGG CAACTTCGCC CAGGCGGCCG CACGCGCTCT GCTGATGAAG
ACCGATCTGT CCGCCCTCGA AGTGGCCCAG ACCGCCCTGG GCATCGCCGG CGACATCTGC
GTGTTCACCA ACCACCACCA GACCATCGAG GAACTGGACG CCGCCGAGTA G
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| Protein sequence | MTTIVSVRRH GKVVMAGDGQ VSLGNTVMKG NAKKVRRLYH GQVLAGFAGA TADAFTLFER
FEGQLEKHQG HLVRAAVELA KDWRTDRSLS RLEAMLAVAN KDASLIITGN GDVVEPEEGL
IAMGSGGNFA QAAARALLMK TDLSALEVAQ TALGIAGDIC VFTNHHQTIE ELDAAE
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