| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0530 |
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| Symbol | |
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| ID | 5108154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 564946 |
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| End bp | 566625 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501743 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
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| Protein accession | YP_001186032 |
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| Protein GI | 146305567 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA AGAACAACGA AGACCTGAAA CGCCAGGCCT CGGAAAACAC CCTGGGACTC
AACCCGGTGA TCGGTATCCG CGGCAAGGAT CTCCTGACAT CTGCCCGCAT GGTGCTCGCC
CAGGCGCTCA AGCAACCCTT CCATAGCGTC AAGCACGTCG CTCACTTCGG CCTCGAGCTG
AAGAACGTCA TGCTCGGCCA GTCCGAGCTC AAGCCCGAAG ACGGCGACCG CCGCTTCGCC
GACCCGGCCT GGAGCCAGAA CCCGCTGTAC CGCCGCTACC TGCAGACCTA CCTGGCCTGG
CGCAAGGAGC TGCACGACTG GATCGAGCAC AGCTCGCTGT CCGAACAGGA CGCCAGCCGC
GGCCACTTCG TCATCAACCT GATGACCGAG GCCATGGCGC CGAGCAACAG CATGGCCAAC
CCGGCCGCGG TCAAGCGCTT CTTCGAGACC GGCGGCAAGA GCCTGCTCGA CGGCCTCTCG
CACCTGGCCA AGGACATGAT TCACAACGGC GGCATGCCCA GCCAGGTGAA CATGGCCGCC
TTCGAGGTCG GCAAGAACCT GGCCACCACC GAGGGCGCCG TGGTGTTTCG CAACGACGTG
CTGGAGCTGA TCCAGTACAA GCCGATCACC GAGAGCGTGC ATGAGCGTCC GCTGCTGGTG
GTGCCGCCGC AGATCAACAA GTTCTACGTC TTCGACCTGT CGCCGGACAA GAGCCTGGCG
CGCTTCCTCC TGCGCAGCCA GGTACAGACC TTCGTGGTCA GCTGGCGCAA CCCGACCAAG
GCGCAGCGCG AGTGGGGCCT GTCCACCTAC ATCGAGGCGT TCAAGGAAGC CATCGACGTC
ATCTGCGCCA TCACCGGCAG CAAGGACGTC AACATGCTCG GCGCCTGCTC CGGCGGCCTG
ACCACCGCCT CCCTGCTCGG CCACTATGCC GCCCTCGGCG AGCAGAAGGT GCATGCCCTG
ACCCTACTGG TCAGCGTACT CGACACCCAG CTCGATACCC AGGTGGCGCT GTTCGCCGAC
GAGAAGACCC TGGAGGCGGC CAAGCGCCGC TCCTACCAGG CCGGTGTGCT GGAAGGCAGC
GACATGGCCA AGGTGTTCGC CTGGATGCGC CCCAACGACC TGATCTGGAA CTACTGGGTC
AACAACTACC TGCTGGGCAA CGAACCGCCG GTGTTCGACA TTCTCTACTG GAACAACGAC
ACCACGCGCC TGCCGGCGGC CCTGCATGGC GAATTCATCG AGATGTTCCA GACCAACCCG
CTGACCCGCC CGGGTGCGCT GGAAGTCTGC GGCACGCCGA TCGACCTGAA GCAGGTCACC
TGCGACTTCT TCGTCGTGGC CGGCACCACC GACCACATCA CCCCCTGGGA TTCCTGCTAC
AAGTCGGCCC ACCTGTTCGG TGGCAAGTGC GAGTTCGTGC TGTCCAACAG CGGCCATATC
CAGAGCATCC TCAACCCGCC GGGCAATCCC AAGGCGCGCT ACATGACCAA CAGCGAGATG
CCGCTGGATC CCAAGGCCTG GCAGGAAAGT TCGACCAAGC ACGCCGACTC CTGGTGGCTG
CACTGGCAAG GCTGGCTGGC CGAGCGCTCC GGCGCGACCA AGGCTGCGCC GAGCAAACTG
GGCAACAAGA AATACCCGGC CGGCGAAGCC GCGCCGGGCA CCTATGTGCA CGAACGCTGA
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| Protein sequence | MSDKNNEDLK RQASENTLGL NPVIGIRGKD LLTSARMVLA QALKQPFHSV KHVAHFGLEL
KNVMLGQSEL KPEDGDRRFA DPAWSQNPLY RRYLQTYLAW RKELHDWIEH SSLSEQDASR
GHFVINLMTE AMAPSNSMAN PAAVKRFFET GGKSLLDGLS HLAKDMIHNG GMPSQVNMAA
FEVGKNLATT EGAVVFRNDV LELIQYKPIT ESVHERPLLV VPPQINKFYV FDLSPDKSLA
RFLLRSQVQT FVVSWRNPTK AQREWGLSTY IEAFKEAIDV ICAITGSKDV NMLGACSGGL
TTASLLGHYA ALGEQKVHAL TLLVSVLDTQ LDTQVALFAD EKTLEAAKRR SYQAGVLEGS
DMAKVFAWMR PNDLIWNYWV NNYLLGNEPP VFDILYWNND TTRLPAALHG EFIEMFQTNP
LTRPGALEVC GTPIDLKQVT CDFFVVAGTT DHITPWDSCY KSAHLFGGKC EFVLSNSGHI
QSILNPPGNP KARYMTNSEM PLDPKAWQES STKHADSWWL HWQGWLAERS GATKAAPSKL
GNKKYPAGEA APGTYVHER
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