| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0528 |
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| Symbol | |
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| ID | 5108152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 562044 |
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| End bp | 563726 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501741 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
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| Protein accession | YP_001186030 |
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| Protein GI | 146305565 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.492103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGACA AGTCGAATCC GGCTCCCCTG CCGGCACCTG CCACCTTCAT GAACGCCCAG
AGCGCCGTGG TCGGCGTCCG CGGACGCGAC CTGCTATCCA CCATGCGGCT GCTCGCCGTG
CAGGGGCTGA AGAGCCCGGT GCGCAGCAGC CGTCATCTGC TGGCCTTCGG CGGCCAGCTC
GGCCGGGTGC TGCTCGGCGA CACCCTGCAC AAGGTCAATC CGCAGGACGC GCGTTTCGCC
GACCCCACCT GGCACCTCAA CCCCTTCTAT CGGCGCAGCC TGCAGGCCTA TCTGGCCTGG
CAGAAGCAGC TGAGCGCCTG GATCGACAAC AGCGACCTGT CCCCGGACGA TCGCGCCCGC
GCGCGCTTTC TCGCCTCACT GATGAGCGAT GCCCTGTCGC CATCCAACAG CCCGCTCAAT
CCGCAGGCGG TCAAGGAACT GTTCAATACC GGCGGCAGCA GCCTGCTCAA GGGCGTGCGC
CATCTGTTCG ACGATCTGCT GCACAACAAC GGCCTGCCCA GCCAGGTCAG CAAGCACGCC
TTCGAGGTCG GTCGCAACCT GGCCTGCACG CCCGGCGCGG TGGTGTTTCG CAACGAGCTG
CTGGAGCTGA TCCAGTACAA GCCGATGAGC GAAAGGCAGT ACCTGCGCCC GCTGCTGATC
GTGCCGCCGC AGATCAACAA GTACTACATA TTCGACCTGT CCAACGACAA GAGCTTCGTC
CAGTACGCCC TGAAGAACGG GCTGCAGACC TTCATGATCA GTTGGCGCAA CCCCGACCCG
CGCCATCGCG AATGGGGCCT GTCGAGCTAC GTGCAGGCCG TCGAGGAAGC CATCGAGGCC
TGCCGCGCCA TCAGCGGCAG CAAGGAGGTC AACCTGCTCG GCGCCTGCGC CGGCGGCCTC
ACCATCGCCG CGCTGCAGGG CCATCTGCAG GCGCGCCGGC AACTGCGCAA GGTATCCAGC
GCCACCTACA TGGTCAGCCT GCTGGACAGC CAGATCGACA GCCCGGCCAT GCTGTTCGCC
GATGAACAGA CGCTGGAATC GGCCAAGCGC CGCTCCTATC AGCAGGGCGT GCTGGACGGT
CGCGACATGG CCAGGGTATT CGCCTGGATG CGCCCCAATG ACCTGATCTG GAACTACTGG
GTCAACAACT ACCTGCTCGG CAAGCAGCCG CCGGCCTTCG ACATCCTCTA CTGGAACAAC
GACAACACAC GCCTACCGGC CGCCCTGCAT GGCGATCTGC TCGACTTCTT CAAGCACAAC
CCGCTGCGCC GTGCCGGTGG TTTGGAGGTG TGCGGCACGC CGGTGGATCT GACCAAGGTC
AACGTCGACA GCTTCAGCGT CGCCGGCATC AACGACCACA TCACCCCCTG GGACGCGGTC
TATCGCTCGA CCCTGCTGCT GGGCGGCAAC CGCCGTTTCG TCCTGTCCAA CAGCGGCCAT
ATCCAGAGCA TCCTCAACCC ACCGGGCAAC CCCAAGGCCA ACTACTACGA GAATGCCAAG
CTCACCTCGG ACCCGCGCGC CTGGTTCCAC GACGCCCAGC ATCAGCAGGG CAGCTGGTGG
CCGCAGTGGC TGGAGTGGAT CCAGGCACGC TCCGGTGAGC AGCGCGAAAC CCTGATGGCG
CTGGGCAACC AGAACCATCC GCCGATGGAG GCAGCCCCCG GCACCTACGT GCATATCCGT
TGA
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| Protein sequence | MRDKSNPAPL PAPATFMNAQ SAVVGVRGRD LLSTMRLLAV QGLKSPVRSS RHLLAFGGQL
GRVLLGDTLH KVNPQDARFA DPTWHLNPFY RRSLQAYLAW QKQLSAWIDN SDLSPDDRAR
ARFLASLMSD ALSPSNSPLN PQAVKELFNT GGSSLLKGVR HLFDDLLHNN GLPSQVSKHA
FEVGRNLACT PGAVVFRNEL LELIQYKPMS ERQYLRPLLI VPPQINKYYI FDLSNDKSFV
QYALKNGLQT FMISWRNPDP RHREWGLSSY VQAVEEAIEA CRAISGSKEV NLLGACAGGL
TIAALQGHLQ ARRQLRKVSS ATYMVSLLDS QIDSPAMLFA DEQTLESAKR RSYQQGVLDG
RDMARVFAWM RPNDLIWNYW VNNYLLGKQP PAFDILYWNN DNTRLPAALH GDLLDFFKHN
PLRRAGGLEV CGTPVDLTKV NVDSFSVAGI NDHITPWDAV YRSTLLLGGN RRFVLSNSGH
IQSILNPPGN PKANYYENAK LTSDPRAWFH DAQHQQGSWW PQWLEWIQAR SGEQRETLMA
LGNQNHPPME AAPGTYVHIR
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