| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0527 |
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| Symbol | |
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| ID | 5108151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 561359 |
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| End bp | 561973 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501740 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001186029 |
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| Protein GI | 146305564 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0603321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCC GCGAGCGCAT CCTGCAAGCC GCCCTGCAGT TGTTCAACGA ACAGGGCGAA
CCCAACGTCT CGACCCTGGA GATCGCCAAC GAGCTGGACA TCAGCCCGGG CAATCTCTAC
TACCACTTTC ACGGCAAGGA GCCGCTGGTG CTGGAGCTGT TCGAACGCTT CCAGGCCGAG
ATGGCGCCGC TGCTCGATCC ACCAGCCGAT GCCGAGCTGG ACGTCGAGGA TTACTGGCTG
TTCCTGCACC TGATCGTCGA ACGCCTGGCG CAGTACCGCT TTCTGTTCCA GGACCTGTCC
AACCTGGCGG GGCGCCTGCC GAAACTGGCG CGCGGCATCC GTCACTGGCT GAATGCACTC
AAACGCACGC TGGCGGCCCT GCTCGCCCGG CTGATGGCCG ACGGGCAGCT GGTCAGCGGC
ACCCAGGCAC TCGGTCAGCT GGTGGAGCAG ATCACCCTGA CCCTGCTGTT CTCCCTCGAC
TACCAGCGCA TCCTCGATCA GGAAGGCGAA GTGCGCCTGG TGGTGTACCA GATCATGATG
CTCGTTGCGC CCCATCTGGC GCAGCCGTCA CGAGGCACTG TCGAGCATCT GGCGCAGCGC
TATCTGGAAG CCTGA
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| Protein sequence | MKTRERILQA ALQLFNEQGE PNVSTLEIAN ELDISPGNLY YHFHGKEPLV LELFERFQAE
MAPLLDPPAD AELDVEDYWL FLHLIVERLA QYRFLFQDLS NLAGRLPKLA RGIRHWLNAL
KRTLAALLAR LMADGQLVSG TQALGQLVEQ ITLTLLFSLD YQRILDQEGE VRLVVYQIMM
LVAPHLAQPS RGTVEHLAQR YLEA
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