Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0525 |
Symbol | |
ID | 5108149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 559965 |
End bp | 560411 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640501738 |
Product | poly(hydroxyalkanoate) granule-associated protein |
Protein accession | YP_001186027 |
Protein GI | 146305562 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01837] poly(hydroxyalkanoate) granule-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.233444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG TTGCCGTGAA GAAGAAAGTC GAAGCCGTGG CCGAGGACAA GGCCGGTCTG TTCGATGACG TGAAGGGCTA CGCCCGCAAG ATCTATCTCG CAGGCCTGGG CGCCTACGCC AAGGCCGGTG CCGAGGGCGT CGAGTACTTC AAGGAGCTGG TCAAGACCGG CGAAGGCGTC GAAGTCAAAG GCAAGAAGCT GGTCGACGAG CAGGTCGAGG CCGCCAACAG CCAGATCGAG TCGGTCAAGC AGTCCGTCAA CTCCAATGTC ACCAGCGTCA AGGGCAAGGT CGAAGTGCAG CTCGACAAGA TCGAGAAGGC CTTCGACACC CGTGTCGCCG CCGCCCTGAA TCGTATCGGC ATTCCCTCGA AGCAGGATGT TGAAGCACTC TCTGCTAAGC TGGATGAGCT GAGCGCGTTG CTCGAGCATG TCGCGCGTAC CAAATAA
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Protein sequence | MSKVAVKKKV EAVAEDKAGL FDDVKGYARK IYLAGLGAYA KAGAEGVEYF KELVKTGEGV EVKGKKLVDE QVEAANSQIE SVKQSVNSNV TSVKGKVEVQ LDKIEKAFDT RVAAALNRIG IPSKQDVEAL SAKLDELSAL LEHVARTK
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