Gene Pmen_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0525 
Symbol 
ID5108149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp559965 
End bp560411 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID640501738 
Productpoly(hydroxyalkanoate) granule-associated protein 
Protein accessionYP_001186027 
Protein GI146305562 
COG category 
COG ID 
TIGRFAM ID[TIGR01837] poly(hydroxyalkanoate) granule-associated protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.233444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAG TTGCCGTGAA GAAGAAAGTC GAAGCCGTGG CCGAGGACAA GGCCGGTCTG 
TTCGATGACG TGAAGGGCTA CGCCCGCAAG ATCTATCTCG CAGGCCTGGG CGCCTACGCC
AAGGCCGGTG CCGAGGGCGT CGAGTACTTC AAGGAGCTGG TCAAGACCGG CGAAGGCGTC
GAAGTCAAAG GCAAGAAGCT GGTCGACGAG CAGGTCGAGG CCGCCAACAG CCAGATCGAG
TCGGTCAAGC AGTCCGTCAA CTCCAATGTC ACCAGCGTCA AGGGCAAGGT CGAAGTGCAG
CTCGACAAGA TCGAGAAGGC CTTCGACACC CGTGTCGCCG CCGCCCTGAA TCGTATCGGC
ATTCCCTCGA AGCAGGATGT TGAAGCACTC TCTGCTAAGC TGGATGAGCT GAGCGCGTTG
CTCGAGCATG TCGCGCGTAC CAAATAA
 
Protein sequence
MSKVAVKKKV EAVAEDKAGL FDDVKGYARK IYLAGLGAYA KAGAEGVEYF KELVKTGEGV 
EVKGKKLVDE QVEAANSQIE SVKQSVNSNV TSVKGKVEVQ LDKIEKAFDT RVAAALNRIG
IPSKQDVEAL SAKLDELSAL LEHVARTK