Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0523 |
Symbol | ubiE |
ID | 5108147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 558601 |
End bp | 559371 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501736 |
Product | ubiquinone/menaquinone biosynthesis methyltransferase |
Protein accession | YP_001186025 |
Protein GI | 146305560 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.846514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC CACGCAAGGC CCAGGAGCAG GAACCCACCA CCCACTTCGG TTTCCAGGAC GTGCCGGAAA GCCAGAAGGC GGAGAAAGTG GCCGAAGTCT TCCACTCGGT GGCGGCCAAG TACGACCTGA TGAACGATGT CCTCTCCGGC GGTCTGCATC GCCTGTGGAA GCGCTTCACC ATCGAGCTGT CCGGCGTGCG CCCGGGCAAC CGCGTGCTGG ATATCGCCGG CGGCACCGGT GACCTGACCC GCAAGTTCGC CAGCATCGTC GGCCCCACCG GCGAAGTGGT GCTGGCCGAC ATCAACGACT CCATGCTCAA GGTCGGTCGT GATCGCCTGC TGGACAAGGG CGTGGCCGGC AACGTGCAGT TCGTCCAGGC CGATGCCGAG AAGCTGCCGT TCCCTGACAA CCACTTCGAC GTGGTCACCA TCGCCTTCGG CCTGCGCAAC GTCACCCACA AGGAAGACGC CCTGCGCTCC ATGCTGCGCG TGCTCAAACC CGGCGGCCGC CTGCTGGTGC TGGAATTCTC CAAGCCCGGC AACCCGCTGC TGGCCAAGGT CTACGACACC TACTCGTTCA GCTTCATGCC GCTGGCCGGC AAGCTGATCA CCAACGATGC CGACAGCTAT CGCTACCTCG CCGAGTCGAT CCGCATGCAC CCGGATCAGG AAACCCTCAA GGCGATGATG GTCGACGCCG GCTTCGAGCG CGTCACCTAC CACAACATGA CCGGCGGCAT CGTCGCCCTG CACCGCGGCA TCAAGCCCTG A
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Protein sequence | MSDPRKAQEQ EPTTHFGFQD VPESQKAEKV AEVFHSVAAK YDLMNDVLSG GLHRLWKRFT IELSGVRPGN RVLDIAGGTG DLTRKFASIV GPTGEVVLAD INDSMLKVGR DRLLDKGVAG NVQFVQADAE KLPFPDNHFD VVTIAFGLRN VTHKEDALRS MLRVLKPGGR LLVLEFSKPG NPLLAKVYDT YSFSFMPLAG KLITNDADSY RYLAESIRMH PDQETLKAMM VDAGFERVTY HNMTGGIVAL HRGIKP
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