| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0509 |
|---|
| Symbol | |
|---|
| ID | 5108428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 549901 |
|---|
| End bp | 550500 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640501722 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186011 |
|---|
| Protein GI | 146305546 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCT GGCAGCCGTT GCTCGACTGG TGGTTCGGTG CCGATGGCAG CGCGACCGAC
ATCGCAGCGG CGCGCCGGGG CTTGTGGTTC GGCAAGCGTG ACAGTCAGGA CCGTGAGGCC
GAAGCGCGTT TCGCTGCGCT GGTCGAGCAG GCCCTGGCTG GCGAGCTGAA AGGCTGGGCG
GATGAGCCGC AGGGCTGGCT GGCGCACCTG ATCCTGCTCG ATCAGCTGCC GCGCATGATC
TTTCGCGATA CCCCGCGCGC CTTTGCGGGG GACGCGCTGG CTCGTCCTCT GCTGGAGGCC
GGGCTGGAGC GCGGCTGGGA CCGTGCGTTG ACGCCGATCC AGCGCGTTTT TGCCTACCTG
ATCTTCGAGC ATGCCGAGGA TCTGCCTCTG CAGGCGCGTG CCGTCGAACT GTTTCGCGCT
CTGCTCGATC AGGCAGGTGA CGCAGAGCGC GAGCTGTTCG CCGACTTTCT CGACTTCGCC
GAGCGTCACC AGCGGGTGAT TGCGCGCTTC GGTCGCTTCC CTCATCGCAA CGCCATTCTC
GGTCGCGCCT GTACTGACGA AGAACAGGCC TTCCTGCGGG AACCTGGCTC GCGTTTCTGA
|
|---|
| Protein sequence | MQPWQPLLDW WFGADGSATD IAAARRGLWF GKRDSQDREA EARFAALVEQ ALAGELKGWA
DEPQGWLAHL ILLDQLPRMI FRDTPRAFAG DALARPLLEA GLERGWDRAL TPIQRVFAYL
IFEHAEDLPL QARAVELFRA LLDQAGDAER ELFADFLDFA ERHQRVIARF GRFPHRNAIL
GRACTDEEQA FLREPGSRF
|
|---|
| |