| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0501 |
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| Symbol | |
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| ID | 5108420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 538491 |
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| End bp | 539456 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501714 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001186003 |
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| Protein GI | 146305538 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG TTACCGACAT CAAGACCTTC GCCGCCCTCG GCACCGGCGT GATCGGCGCC
GGCTGGATCG CCCGCGCCCT GGCTCACGGC CTTGACGTGA TCGCCTGGGA CCCGGCGCCC
GGCGCCGAGG CCGCGCTGCG CACGCGCCTG GCCAACGCCT GGCCGGCGCT GCAGAAGCAG
GGCCTGGCCC CCGGCGCCTC GCTGGAGCGC CTGCGCTTCG TGGACACCAT CGAAGACTGC
GTACGCGATG CCGATTTCAT CCAGGAGAGC GCCCCCGAGC GCCTCGAGCT CAAGTGCGAG
CTGCACGCGA AGATCAGTGC CGCCGCGCGC CCGGATGTGT TGATCGGCTC CAGCACCTCG
GGCCTGCTGC CCAGCGAATT CTATGCAGAC GCCAAGCATC CCGAGCGCTG CCTGGTCGGC
CACCCGTTCA ACCCGGTCTA TCTGCTGCCG CTGGTGGAGG TGGTGGGCGG CGCGAAGACC
GCCCCTGAGG CGGTGCAGGC CGCCATCGAG GTCTACCAAT CGTTGGGCAT GCGCCCGCTG
CATGTGCGCA AGGAGGTGCC GGGCTTTATC GCCGACCGCC TGCTCGAGGC CCTGTGGCGC
GAGGCGCTGC ATCTGGTCAA CGACGGCGTG GCGAGCACCG GCGAGATCGA CGATGCGATC
CGCTTCGGCG CCGGCCTGCG CTGGTCGTTC ATGGGCAGCT TCCTGACCTA CACCCTGGCC
GGCGGCCCGG CCGGCATGCG TCACTTCATG GCCCAGTTCG GCCCGGCGCT GAAGCTGCCC
TGGACGTACC TTGAGGCGCC GGAGCTGACC GAGGGGCTGA TCGACGCGGT GGTCGAGGGC
ACAGCCGAGC AGCAGGGCGA ACGCAGCCTG GATGCCCTGG AGCGCTATCG CGACGATTGC
CTGCTGGCGG TGCTGGAGGC GATCCGCCAG ACCAAGGCCA AGCATGGCTT CGAGTTCGCC
GAGTAA
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| Protein sequence | MTFVTDIKTF AALGTGVIGA GWIARALAHG LDVIAWDPAP GAEAALRTRL ANAWPALQKQ
GLAPGASLER LRFVDTIEDC VRDADFIQES APERLELKCE LHAKISAAAR PDVLIGSSTS
GLLPSEFYAD AKHPERCLVG HPFNPVYLLP LVEVVGGAKT APEAVQAAIE VYQSLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNDGV ASTGEIDDAI RFGAGLRWSF MGSFLTYTLA
GGPAGMRHFM AQFGPALKLP WTYLEAPELT EGLIDAVVEG TAEQQGERSL DALERYRDDC
LLAVLEAIRQ TKAKHGFEFA E
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