| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0490 |
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| Symbol | |
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| ID | 5108409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 525496 |
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| End bp | 526590 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501703 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001185992 |
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| Protein GI | 146305527 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGT TCACTCAAGG GGCGCAACCC CAGAACCGTG TCGCCCAGTC CATTGGCTTT
CTGCTTCTGG ACAACTTCAC CCTGATTTCC CTCGCGTCGG CGGTGGAGCC CCTGCGCATG
GCCAACCAGC TCTCCGGCAA GGAGCTGTAT CGCTGGCACA CCCTCACGCA CGACGGCCTC
CCGGTCAGCG CCAGCGATGG TCTGCAGATC ACCCCGGATG CCGCCATGCA CAGCGCGCCG
GCGCTGGATG CGGTGATCGT CTGCGGTGGC GTCGATATCC AGCACAGCGT CAAACGCGAG
CACGTCAGCT GGCTGCAGCT GCAGGCGCGC CAGGGCCGTC AGCTCGGCGC GGTGTGCACC
GGCAGCTGGG CGCTGGCCAA GGCCGGTCTG CTCGACGGCT ACGATTGCAG TGTGCACTGG
GAGTGTCTGG CCTCGATGCA GGAAGCCTTC CCGCGCGCCG CCATCACCAC CCGCCTGTTC
TCCATCGACC GCAACCGCCA CACCTCCTCC GGCGGCACCG CGCCGATGGA CATGATGCTG
CACCTGATCG GCCAGCAGCA CGGTCGCGAA CTGGCCGCCG GCATCTCCGA GATGTTCATC
TACGAGCGCA TTCGCAACGA ACAGGATCAC CAGCGCGTGC CGCTCAAGCA CATGCTCGGC
AGCAACCAGC CGAAGCTGCA GGAAATCGTC GCGCTGATGG AGGCCAACCT CGAGGAGCCC
ATCGACCTCG ACGAGCTGGC CTGCTTCGTC GACATTTCCC GCCGCCAGCT CGAGCGCCTG
TTCCAGAAGT ACCTGCACTG CTCGCCGTCG CGCTACTACC TCAAGCTGCG CCTGATCCGC
GCCCGCCAGC TGCTCAAGCA GACCAGCATG TCGATCATCG AGGTGGCGTC GGTGTGCGGC
TTCGTCTCCA CCCCGCACTT CTCCAAGTGC TACCGCGAGT ATTTCGGCAT TCCGCCGCGC
GACGAGCGCG CCGGTCAGCA GGGCCACAAC CTGGTGGTGC TGCTGCCGAT TCCCGAGCAG
CAGATCAACT CCAGTGCCGT GCTGGCGCTC AATCGCGCCC AGGGCGAATC GACCTTCGCC
AGCGTACGCA TCTGA
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| Protein sequence | MSQFTQGAQP QNRVAQSIGF LLLDNFTLIS LASAVEPLRM ANQLSGKELY RWHTLTHDGL
PVSASDGLQI TPDAAMHSAP ALDAVIVCGG VDIQHSVKRE HVSWLQLQAR QGRQLGAVCT
GSWALAKAGL LDGYDCSVHW ECLASMQEAF PRAAITTRLF SIDRNRHTSS GGTAPMDMML
HLIGQQHGRE LAAGISEMFI YERIRNEQDH QRVPLKHMLG SNQPKLQEIV ALMEANLEEP
IDLDELACFV DISRRQLERL FQKYLHCSPS RYYLKLRLIR ARQLLKQTSM SIIEVASVCG
FVSTPHFSKC YREYFGIPPR DERAGQQGHN LVVLLPIPEQ QINSSAVLAL NRAQGESTFA
SVRI
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