| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0487 |
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| Symbol | |
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| ID | 5108406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 521696 |
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| End bp | 522901 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501700 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001185989 |
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| Protein GI | 146305524 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCTG GAAAGATCGT GGTCGAACAC CTGTACAAGG TTTTCGGCCC CAACCCACAA
GAAGCCATCG ACCTGCTCAA GGAAGGCTGG AGCAAGGAGC GGATTCTTGC CGAGAAAGGC
GCCGTGATCG GCGTGAGCGA TGTGTCGTTC AGCGTCGAGG AGGGCGAGAT CTTCGTTCTC
ATGGGCTTGT CCGGTTCCGG CAAGTCCACC CTGATCCGTC TGATCAACCG CCTGGTCGAA
CCCAGCGCCG GCGACGTCTA CATCGACGGA CAGAACGTGG CCAAGCTGCC GCAATCGCAA
CTGATCGACC TGCGTCGCCG CGACATGAGC ATGGTCTTCC AGTCCTTTGC CCTGATGCCT
TCGCGCAGCG TGCTGGATAA CGCCGCGTTC GGCCTGGAAG TGGCCGGCGT CGGCCGCAAG
GAGCGCGAGA AGCGCGCCAT GGAAGTACTC AAGCAGGTCG GCCTGGATAC CTTCGCCCAC
AAGTATCCGC ACGAGCTGTC CGGCGGCATG CAGCAGCGCG TCGGCCTGGC CCGCGCACTG
ACGGTGAACC CGTCGATGAT CATCATGGAC GAGGCCTTCT CCGCCCTCGA TCCGCTCAAG
CGCCGCGAGA TGCAGGACGT GCTGCTGGAG CTGCAGAAGA CCCACCGCCG CACCATCATC
TTCGTCTCCC ACGACATCGA GGAAGCCATG CGCATCGGTA CCCGCATCGG CATCATGGAA
GGCGGCAGGC TGATCCAGGT CGGCACCCCG CAAGAGCTGA TCGAGAAGCC GGCCAACGAG
TACGTGCGCA ACTTCTTCGA CACCGTGGAC ACCAGCCGCT ACCTCACCGC CGGCCAGCTC
AAGGCCGACA GCGTGCCGAC CTACGTGCAC AACGGCAGGG CGCCGGACGC GGCGAAGATC
TGCAAGGAGC TGCAGGCGCT GGACAAGCAC TACGCCTTCA TCGTCGACGA GGACAACCAT
TTCCAGGGCT CCATCAGCCT GGAGAAGATC GCCCTGATGG TCGACGGCGA CGAGCCCAGA
CCTCTTGAAG CCAACGTCCT CAAGCAGGTG GTGCCGGTGC CGGAAGACAT GCCGCTGGAA
GACGTCATCA GCCGCCTGGT GGACAACGAG GGGCCGATTC CGGTGGTCGA TGCCGAAGGT
CATTACTGCG GTGCCATCAG CAAGGGCCGT CTGCTGACCC GCCTGCAGGG GGAATCCCAT
GAGTGA
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| Protein sequence | MQSGKIVVEH LYKVFGPNPQ EAIDLLKEGW SKERILAEKG AVIGVSDVSF SVEEGEIFVL
MGLSGSGKST LIRLINRLVE PSAGDVYIDG QNVAKLPQSQ LIDLRRRDMS MVFQSFALMP
SRSVLDNAAF GLEVAGVGRK EREKRAMEVL KQVGLDTFAH KYPHELSGGM QQRVGLARAL
TVNPSMIIMD EAFSALDPLK RREMQDVLLE LQKTHRRTII FVSHDIEEAM RIGTRIGIME
GGRLIQVGTP QELIEKPANE YVRNFFDTVD TSRYLTAGQL KADSVPTYVH NGRAPDAAKI
CKELQALDKH YAFIVDEDNH FQGSISLEKI ALMVDGDEPR PLEANVLKQV VPVPEDMPLE
DVISRLVDNE GPIPVVDAEG HYCGAISKGR LLTRLQGESH E
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