| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0477 |
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| Symbol | |
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| ID | 5108396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 509436 |
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| End bp | 510176 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501690 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185979 |
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| Protein GI | 146305514 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC CCGCAGTGCG CACCTGGCTT CTGCCGCTGT TGCTGTTGTC GCCTCTTCTG
GCACTGGCCG AGCCGCTACG GCTGGTGGCC GACCCCTGGC CACCCTTCAC CGACCGCCGC
CTGCCCGCCA ACGGGCTGGC CAGCGACCTG GTGGTGCAGG CCCTGAAACG GGCGGGCTAC
GACAGCCACT ATGCCGAGGT GCCCTGGGAG CGAGCGGTTT GGGGGCTGCA GCGCGGCGAT
TACGACGTGC TGATCAACGC CTGGTACAGC GCCGATCGCG AAGCCTTCGG GCATTACTCG
CAACCGTATC TGGTCAATCG CATTCGCTTC CTGCAGCGCA AGGGCAGCGG CATCCGTTTC
GCCAGCCTGA GCGACCTGTA TCCCCACCGC ATCGCGGTAG TGCGCGGTTA CGCCTACGCC
AAGGCATTCG ACAGCGACGA GCAGCTGCGC AAGGTGGGCG CCGTCAGCTT CGAGAGCGCC
GCGCGCATGC TGCACGCCGG GCGGGTGCAA CTGGCTCTGG AGGACGAACT GGTGGCCCGC
TATCACCTCG GTCGCGAGCT GCGCGCCATT CGCGGCGAGC TGGAGTTCCT GCCGCTGCCG
TTGAGCGAGA ACGGCCTGCA CATCCTGGTG CGCCTAGGCC ACCCCGAGCA CCGCCAGATC
GCCACGCGCT TCGACGGGGC GATCCAGACC ATGCGCGAGG ATGGCAGCTA CGCCGCGACG
CTCGAACGCC ACGGTTTTTG A
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| Protein sequence | MPMPAVRTWL LPLLLLSPLL ALAEPLRLVA DPWPPFTDRR LPANGLASDL VVQALKRAGY
DSHYAEVPWE RAVWGLQRGD YDVLINAWYS ADREAFGHYS QPYLVNRIRF LQRKGSGIRF
ASLSDLYPHR IAVVRGYAYA KAFDSDEQLR KVGAVSFESA ARMLHAGRVQ LALEDELVAR
YHLGRELRAI RGELEFLPLP LSENGLHILV RLGHPEHRQI ATRFDGAIQT MREDGSYAAT
LERHGF
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