| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0474 |
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| Symbol | |
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| ID | 5108393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 505225 |
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| End bp | 505968 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501687 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001185976 |
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| Protein GI | 146305511 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGGC CGCAGCCGTT CGGGCAGCGG CTGATTGCGA GACAGCGCCA CCGGCTCCGG
CCACGCTGGC CGCTTCGAAG GCGAACCCGC GCCGTGGAGG AAAGCACCAT GTCCAGCCGT
CGCCATCTCC TGCTCGCCGC CGGCGGCGCC CTGCTGGCCA GCCCTTCGCT GGTGCTGGCC
GAGCGCCTGC TGACGCCGCG GCAGACGCTG GGCCCCTTCT ACCCCGACCA ACTGCCGCTC
GATAACGACA ACGACCTGGT GCAGGTCGAA GGCCGGGCCG AGGAGGCGCG CGGCATTCGC
GTGCAGTTGC ACGGCTCGAT CCTCGATGCC GGCGGTCGGC CGCTGGCCGG GGCGCTGGTG
GAAATCTGGC AGGTCGATGC CAACGGCATC TACCTGCACA GCCGTGGCGG CGATCGCCAG
CGGCTCGACC CCGGTTTTCA GGGCTATGGC CGCTTCGTCA CGGAGGCGGA CGGTCGTTAT
GGCTTTCGCA CCATCCGCCC GGTGTCCTAT CCCGGACGTA CCCCGCATAT CCACCTGGCG
GTGACCCTGC CCGGCATGCC GCGCTTCGCC ACCCAGTGCT ATATCCGCGG CGAGCCGGGC
AACCAGCGCG ACGGTCTGCT CAACGCCATC CGCGATCCAC GCCTGCGCGA ACTGCTGATC
GTGCCTTTCG TGCCGGTGAG CGGGCAGGTC AACCAGCAGA TTGCCCGCTT CGATGTGGTC
CTCGGCGTCA CCCCGGCCTC ATGA
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| Protein sequence | MGRPQPFGQR LIARQRHRLR PRWPLRRRTR AVEESTMSSR RHLLLAAGGA LLASPSLVLA
ERLLTPRQTL GPFYPDQLPL DNDNDLVQVE GRAEEARGIR VQLHGSILDA GGRPLAGALV
EIWQVDANGI YLHSRGGDRQ RLDPGFQGYG RFVTEADGRY GFRTIRPVSY PGRTPHIHLA
VTLPGMPRFA TQCYIRGEPG NQRDGLLNAI RDPRLRELLI VPFVPVSGQV NQQIARFDVV
LGVTPAS
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