Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0472 |
Symbol | |
ID | 5108391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 503101 |
End bp | 503850 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640501685 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_001185974 |
Protein GI | 146305509 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTCG AATTGAGTTT TCTGTCACTG GCAATCATCG TCCTGGCCCT GCTCGCCTCG GCGTTTCGCA TCCTGCGCGA ATACGAGCGC GGCGTGGTGT TTCAGCTCGG CCGCTTCTGG CGGGTCAAGG GACCGGGGCT GATCCTGGTC ATCCCCGGTC TGCAGCAGAT GGTGCGGGTG GACCTGCGTA CCCTGGTGCT GGACGTGCCG ACCCAGGACG TGATCTCCCG CGACAACGTC TCGGTCAAGG TCAATGCGGT GGTCTATTAC CGCGTGCTCG ACCCGCAGCG GGCGATCATC CAGGTCGAGG ATTACCACTC GGCCACCAGT CAGCTGGCAC AGACCACCCT GCGCGCCGTG CTCGGCAAAC ACGAGCTGGA CGACATGCTC GCCGAGCGCG AGCGGCTCAA CGTGGACATC CAGCAGGTGC TCGACGCGCA GACCGATGCC TGGGGCATCA AGGTGGCGAA CGTCGAGATC AAGCACGTCG ACCTGGATGA GTCGATGGTG CGCGCCATCG CCAGGCAGGC CGAGGCCGAG CGCGAGCGGC GGGCCAAGGT GATTCACGCC GAAGGCGAAC TGCAGGCCGC GGAGAAGCTC ATGCAGGCCG CCGAAATCCT CGGCCGGCAG AGCGGCGCCA TGCAGCTGCG CTACATGCAG ACCCTGGGCA GCATCGCCAG TGACAAGAGC TCGACCATCG TCTTCCCGCT GCCGGTGGAG CTGTTGCAGG GAATCGCCGA GAAGAAGTAG
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Protein sequence | MGFELSFLSL AIIVLALLAS AFRILREYER GVVFQLGRFW RVKGPGLILV IPGLQQMVRV DLRTLVLDVP TQDVISRDNV SVKVNAVVYY RVLDPQRAII QVEDYHSATS QLAQTTLRAV LGKHELDDML AERERLNVDI QQVLDAQTDA WGIKVANVEI KHVDLDESMV RAIARQAEAE RERRAKVIHA EGELQAAEKL MQAAEILGRQ SGAMQLRYMQ TLGSIASDKS STIVFPLPVE LLQGIAEKK
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