| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0470 |
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| Symbol | |
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| ID | 5108389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 499316 |
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| End bp | 501484 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501683 |
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| Product | YccS/YhfK family integral membrane protein |
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| Protein accession | YP_001185972 |
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| Protein GI | 146305507 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.393999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCC CCCACCTCAG CCAAACGCTG CGCCGCCTCT GGGCGCTGGA CAAGTTCAGC
GCCAGCCTGC GGGTATTCAT CGCCCTGGCC GGAGCCTTGG CGCTGTGCTG GTGGCAGGGT
TGGGTGCACG GGCTGATTCC GCTGTTTCTC GGCATCATCG CCAGCGCCCT GACCGAGACC
GACGACAGCT GGCAGGGCCG CCTGGGCACC GTGCTGGTGA CCCTGGTGTG CTTCAGTGCG
GCGGCCTATG CGGTGGAGTT CCTCTTTCCC TACCCCTGGC TGTTCGTCGT TGCCCTGGCC
TGTTCCGCCT TCTGCCTGAC CATGCTCGGC GCGCTCGGCG AGCGCTTCGC CACCCTCGGC
TCGGGCACGC TGATCCTCGC CGTGTACAGC ATGATCGGCC TGGAACAGCG CGGCGGCGTT
GCCGGTCTGT GGCTGGAGCC GCTGCTGCTG GTAGCCGGCG CCGCCTGGTA CGGCCTGCTG
TCGGTGATCT GGCACGCGCT GTTCGCCCAC CAGCCGGTGC AGCTCGCCCT GGCCCGGCTG
TTTCGCGAAC TGGGCAAGTA CCTCAAGCTC AAGGCGGCGC TGTTCGAGCC ACTGCGCCAG
CTGGACGTGG AGCAGCGCCG CCTGGAGCTG GCGCAGCAGA ACGGACGGGT GGTGTCGGCC
CTCAACGCGG CCAAGGAAAT CATCCTGCAC CGGGTCGGTG GCGCTCGCCC GGCGCCCAAG
GTCAATCGCT ACCTGAAGCT GTACTTCCTC GCCCAGGACA TCCACGAGCG CGCCAGCTCC
TCGCACTACC CCTACAACGA ACTGGCCGAA GCCTTCTTCC ACAGCGACGT GCTGTTTCGC
TGCCAGCGCC TGCTGCGCCT GCATGGCGAG GCCTGTCAAC GGCTGGCCAC CGCCATCGAG
CTGCGCCAGC CGTTCGAGTA CCGCGAGCTG TGCAGTCAGG CCCTGGAAGA TCTGCACGCC
TCCCTCGACC ACCTGCATCT GCAGAGCAAC CCGGCCTGGC GCCGCCTGCT GCGCTCGCTG
GGCGCGCTGG CGGGCAACCT GGCCACGCTC GACCAACTGC TCGGCAACGC CAGCAACCCC
GACGCCCTGG CCGAGGAACA GGACAGCAGC CTGCTGGATC GCGAACCGCA TTCGCTGCGC
GAGGTCATCG AACGCATCGG CCAGCAGCTG ACGCCCACCT CGCTGCTGTT TCGCCATGCG
CTGCGCCTGT CCATCGCCCT GGCCGCGGGC TATGGCCTGC TGCACCTGAT CCACCCGACC
CAGGGCTACT GGATCCTGCT GACCACCCTG TTCGTCTGCC AGCCGAACTA CGGCGCCACG
CGCCTGAAGC TGGTGCAGCG CATTCTCGGC ACCCTGCTCG GCCTGGGAAT CGGCTGGGCG
CTGTTCGACC TGTTCCCCGA TCCGCGCATC CAGGCGCTGT TCGCCGTGGT CGCCGGGGTG
GCCTTCTTCG CCACCCGCGC CACCCGCTAC ACCCTGGCCA CTGCGGCAAT CACCCTGCTG
GTGCTGTTCT GCTTCAACCA GATCGGCGAT GGCTACGGCC TGTTCCTGCC GCGCCTGATC
GATACCCTGC TCGGCGGCCT GATCGCCGGC CTGGCGGTGT TCCTGATCCT GCCGGACTGG
CAGGGCCGGC GCCTGGGGCG CATGTTGGCG AACACCCTGA GCTGCAACAG CGCCTACCTG
CGCCAGATCA TCGCCCAGTA CGCCCACGGC AAACGCGACG ACCTCGGTTA TCGCCTGGCC
CGGCGCAATG CCCACAATGC CGACGCGGCG CTATCCACCA CGCTCGGCAA CATGCTGATG
GAACCGGGGC ACTTCCGTAA GGACGCCGAT CTGGGCTTTC GCTTTCTGGT GCTGTCGCAC
ACCCTGCTCA GCTACCTCTC CGCACTCGGC GCGCACCGTG GTGAGCAGCT GCCGCAGGCC
GTCCAGGCGC AGTTGCTGGA ACAGGCCGAG CACCTCGCCG CCAGCCTCGA CGAGATCGCC
GCGGGCCTGC GCGGCGAACG CCCGCTGGCG ATTCACAGCG ACGAAGAGCA GGAACTGGCC
CAGGCCCTGG AGCAGATCGC CGATGACGCC GACGAGCGCC AGCGCCTGGT GCAGACCCAA
CTGGCGCTGA TCTGCCGGCA ACTGGCGCCG CTGCGCACCC TCGGCGCCCA TCTGCACAAG
GACGGCTGA
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| Protein sequence | MPRPHLSQTL RRLWALDKFS ASLRVFIALA GALALCWWQG WVHGLIPLFL GIIASALTET
DDSWQGRLGT VLVTLVCFSA AAYAVEFLFP YPWLFVVALA CSAFCLTMLG ALGERFATLG
SGTLILAVYS MIGLEQRGGV AGLWLEPLLL VAGAAWYGLL SVIWHALFAH QPVQLALARL
FRELGKYLKL KAALFEPLRQ LDVEQRRLEL AQQNGRVVSA LNAAKEIILH RVGGARPAPK
VNRYLKLYFL AQDIHERASS SHYPYNELAE AFFHSDVLFR CQRLLRLHGE ACQRLATAIE
LRQPFEYREL CSQALEDLHA SLDHLHLQSN PAWRRLLRSL GALAGNLATL DQLLGNASNP
DALAEEQDSS LLDREPHSLR EVIERIGQQL TPTSLLFRHA LRLSIALAAG YGLLHLIHPT
QGYWILLTTL FVCQPNYGAT RLKLVQRILG TLLGLGIGWA LFDLFPDPRI QALFAVVAGV
AFFATRATRY TLATAAITLL VLFCFNQIGD GYGLFLPRLI DTLLGGLIAG LAVFLILPDW
QGRRLGRMLA NTLSCNSAYL RQIIAQYAHG KRDDLGYRLA RRNAHNADAA LSTTLGNMLM
EPGHFRKDAD LGFRFLVLSH TLLSYLSALG AHRGEQLPQA VQAQLLEQAE HLAASLDEIA
AGLRGERPLA IHSDEEQELA QALEQIADDA DERQRLVQTQ LALICRQLAP LRTLGAHLHK
DG
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