Gene Pmen_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0466 
Symbol 
ID5108385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp496011 
End bp496502 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID640501679 
Producthypothetical protein 
Protein accessionYP_001185968 
Protein GI146305503 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATATC TTCAGGGTTA TCCCGTCGCC TTGCAGCAAC AGGTTCGCCA ACTGATCGCC 
GATGATCGAC TGGGCGACTA CCTGGCGCAG CGTTACCCCG GCCGCCACGA GGTGCAGAGC
GACAAGGCGC TGTACGGCTA CGTGATGGCG CTCAAGCAGG AGCATCTGAA GAACGCGCCG
GCCATCGACA AGGTGCTCTA CGACAACCGC CTCGACCTTA CCCATCGGGC GCTGGGCCTG
CACACGGCGA TCTCGCGGGT GCAGGGCGGC AAGCTCAAGG CGAAGAAGGA AATCCGCGTC
GCTTCGCTGT TTCGCGACGC GGCGCCGGCC TTCCTGCAGA TGATCGTGGT GCACGAGCTG
GCGCACCTGA AGGAGGCCGA ACACAACAAG GCCTTCTACA AGCTCTGCGA TCACATGCTG
CCGGGCTATG CGCAGATCGA GTTCGACCTG CGCATGTACC TGACCTGGCG CGAGATGACG
GGCTCGGCAT GA
 
Protein sequence
MKYLQGYPVA LQQQVRQLIA DDRLGDYLAQ RYPGRHEVQS DKALYGYVMA LKQEHLKNAP 
AIDKVLYDNR LDLTHRALGL HTAISRVQGG KLKAKKEIRV ASLFRDAAPA FLQMIVVHEL
AHLKEAEHNK AFYKLCDHML PGYAQIEFDL RMYLTWREMT GSA