| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0463 |
|---|
| Symbol | |
|---|
| ID | 5108382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 493287 |
|---|
| End bp | 493970 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640501676 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001185965 |
|---|
| Protein GI | 146305500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC TCGCCATGTG GAATCTCAGC GTTCCAGTCG GCGTACCCGC CACCACCATC
GAGACACGCG TACTGGCCGG TGGCTACCAG GATCACTATT TTCAGTCCAA GGAAGGTGCG
ATCTTCTTCT GGGCACCGGT CAATGGCACC ACGACCGAGA GCGCCAAGTA TCCCCGCACC
GAACTGCGCG AAACCTTTGC CGACGGCCGC CTGCGCAACT GGACCTACCC GGAGGCGGAC
CATTTTCTAC GGGCGTCGCT GAGCGTCAGC CAGGTGCCGT CCACCGGCAA GATCGTCATC
GGCCAGATCC ACGCCTTCAA GAGTTCGGAG CCGCTGCTCA AGCTGGAGTA CCAGTACAAG
ACCAAGACCG CCGACGGCAA CATCGTCGCC AAGGTCCGTC CGAGCCCGGA CGCTGCCATC
CAGACCGTGA CCGTGGCCAG CGGCATCCGC CTGAATCAGC CGTTTCGCTA CGTGATCAAC
CTGAAGCCCG ATGGCACCCT GGCCATCAGC CTCAACAGCA TCAACTGGAG CGCGCGGATG
GACCCGACCT GGGCGGCGAG GCCCCTGTAC TTCAAGGCCG GGGTCTACAC CCAGGACAAC
ACCGGCTATG AAACCGAAGC CGGCGCCGCG CGCTTCGATC AGCTCAGCAT CGAGCACCGC
TCGCTGCTCG GCTCGGCGAA GTAA
|
|---|
| Protein sequence | MIELAMWNLS VPVGVPATTI ETRVLAGGYQ DHYFQSKEGA IFFWAPVNGT TTESAKYPRT
ELRETFADGR LRNWTYPEAD HFLRASLSVS QVPSTGKIVI GQIHAFKSSE PLLKLEYQYK
TKTADGNIVA KVRPSPDAAI QTVTVASGIR LNQPFRYVIN LKPDGTLAIS LNSINWSARM
DPTWAARPLY FKAGVYTQDN TGYETEAGAA RFDQLSIEHR SLLGSAK
|
|---|
| |