Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0455 |
Symbol | |
ID | 5108374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 483670 |
End bp | 484674 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640501668 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_001185957 |
Protein GI | 146305492 |
COG category | [H] Coenzyme transport and metabolism [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GCGCCCCCCA GCTGGACTTC GACCCCTGCG ACGAGCTCGC CGCCCTGTGC AAGGCCGGCG GCGACGCGCT GCGCCTGAAC GTTCTGCGCG CGCTGAGCAA CGACTCGTTC GGCGTGCTGG AGCTGGCGCA GATCTTCGCC ATCGGCCAAT CCGGCATGAG CCACCACCTC AAGGTCCTGG CCCAGGCCGG CCTGGTGGCC ACGCGGCGCG AAGGCAACGC CATCTTCTAC CGCCGCGCCC TGCCCGGCGG CCGCCTGCAT GCGGCTCTGC TGGACGACAT CGACGAGCTG CCGCTGCCAG GCGAGGTGCA GGCACGCATC GCCACCGTGC ATCAGCAGCG CGCCACCGTC AGCCGCGACT TCTTCGCCCG CATGGCCGCC AGTTTCCAGG CCCAGCAGGA CCTGATCGCC GGCCTGCCGC AATACCGCGA CAGCCTGCTG GCGCTGCTCG ATGCGCTGCA GTTCGCGCCC GATGCCAGTG CCCTGGAGAT CGGTCCCGGC GACGGCGCCT TCCTGCCCGA GCTGGCCCGC CGTTTCACCC GCGTCACCGC ACTGGACAAC AGCCCGGCGA TGCTCGAGCT GGCCAGCCAG CGCTGCGCCG CCGAAGGCCT GGCCAACGTC GAGCTGAAGC TGGCCGACGC TCTGCAGGAT GAGCAGCCGC CGGCCGATTG CGTGGTGCTG AACATGGTGC TGCACCATCT CGCCACGCCG GCCGAGGCGT TTCGCCAACT GGCGCGACTG GTCGCTCCCG GCGGCAGCCT GCTGCTCAGC GAGCTGTGCA GCCATGACCA GAGCTGGGCC AGGGAAGCCT GCGGCGATCT CTGGCTCGGC TTCGAACAGG ACGATCTGGC GCGCTGGGCG ACGGCCGCCG GCCTGGTCCC CGGCGAAAGC CTCTACATCG GCCTGAAGAA CGGCTTTCAG ATTCAGTTAC GGCACTTCGC CAAACCCATC ACGCGACCTG CCACCCGTTA CGGCACACAA GGAACCCACC CATGA
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Protein sequence | MTLRAPQLDF DPCDELAALC KAGGDALRLN VLRALSNDSF GVLELAQIFA IGQSGMSHHL KVLAQAGLVA TRREGNAIFY RRALPGGRLH AALLDDIDEL PLPGEVQARI ATVHQQRATV SRDFFARMAA SFQAQQDLIA GLPQYRDSLL ALLDALQFAP DASALEIGPG DGAFLPELAR RFTRVTALDN SPAMLELASQ RCAAEGLANV ELKLADALQD EQPPADCVVL NMVLHHLATP AEAFRQLARL VAPGGSLLLS ELCSHDQSWA REACGDLWLG FEQDDLARWA TAAGLVPGES LYIGLKNGFQ IQLRHFAKPI TRPATRYGTQ GTHP
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