| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0437 |
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| Symbol | |
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| ID | 5108358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 463413 |
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| End bp | 465056 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640501652 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001185941 |
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| Protein GI | 146305476 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0809367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGTTAG GTCAGATGAT GCGTAATCAG TTGGTCATTG GTTCGCTTGT TGAGCATGCT
GCACGATATC ATGGTGCGAG AGAGGTGGTT TCAGTCGAAA CCTCTGGAGA AGTAACAAGA
AGTTGTTGGA AAGAAGTGGA GCTTCGTGCT CGTAAGCTCG CTTCTGCATT GGGCAAGATG
GGTCTTACGC CTAGTGATCG TTGTGCAACG ATTGCATGGA ACAATATTCG TCATCTTGAG
GTTTACTACG CTGTCTCTGG CGCAGGAATG GTATGCCATA CAATCAATCC GAGGCTTTTC
ATTGAGCAGA TCACATATGT GATAAACCAT GCGGAGGATA AGGTAGTATT TCTTGATGAT
ACGTTCTTGC CAATCATTGC TGAGATTCGC GGTTCGTTAC CAAAAGTCAA GGCGTTTGTC
TTGATGGCTC ATAATAATTC AAATGCATCT GCTCAAATGC CAGGATTGAT TGCATACGAG
GATCTAATTG GTCAGGGTGA TGATAACTAT ATATGGCCTG ATGTAGATGA AAATGAGGCG
TCTAGTCTAT GTTACACATC AGGTACTACG GGCAACCCGA AGGGTGTACT TTATTCACAC
CGCTCGACAG TTTTGCATTC AATGACCACC GCAATGCCAG ACACACTAAA TTTGTCTGCG
CGAGATACCA TTTTGCCCGT AGTTCCAATG TTTCATGTAA ATGCATGGGG GACTCCATAT
TCCGCTGCAA TGGTTGGTGC GAAGCTAGTT CTTCCTGGTC CGGCTCTTGA TGGCGCTAGT
TTATCGAAGT TGATTGCTAG CGAAGGAGTT AGCATTGCTC TTGGGGTGCC GGTTGTTTGG
CAGGGGTTGT TAGCGGCACA AGCCGGTAAT GGTTCTAAAA GCCAAAGCCT CACGCGGGTT
GTTGTAGGAG GTTCGGCCTG TCCTGCGTCT ATGATTAGAG AATTTAACGA TATATATGGT
GTTGAAGTTA TTCATGCTTG GGGTATGACT GAGCTTTCGC CATTTGGCAC GGCAAACACT
CCACTCGCGC ACCACGTAGA TTTATCTCCA GATGAAAAGC TTTCACTGCG CAAAAGCCAA
GGGCGCCCGC CTTACGGTGT CGAGTTAAAA ATCGTTGATG ATGAGGGGAT TAGACTACCT
GAAGATGGTC GAAGTAAAGG CAACCTAATG GCGCGTGGGC ACTGGGTTAT TAAAGATTAC
TTTCATAGCG ATCCTGGTTC GACACTCTCA GATGGTTGGT TTTCAACTGG AGACGTGGCT
ACCATAGATT CGGACGGTTT CATGACAATC TGTGATCGTG CAAAGGACAT TATAAAGTCT
GGCGGTGAGT GGATCAGTAC GGTAGAGCTG GAGAGTATTG CGATTGCGCA CCCTCATATT
GTTGATGCTG CTGTTATAGC TGCAAGGCAC GAAAAATGGG ACGAGCGACC TCTCCTCATC
GCAGTTAAAT CCCCTAATTC GGAATTAACA AGTGGTGAGG TATGTAATTA TTTCGCAGAT
AAGGTGGCTA GATGGCAAAT TCCAGATGCC GCTATCTTTG TTGAAGAACT GCCACGCAAT
GGTACTGGCA AGATTTTGAA GAATCGTTTG CGCGAGAAAT ATGGTGATAT TTTATTGCGC
AGTAGTTCTT CTGTCTGTGA ATAA
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| Protein sequence | MMLGQMMRNQ LVIGSLVEHA ARYHGAREVV SVETSGEVTR SCWKEVELRA RKLASALGKM
GLTPSDRCAT IAWNNIRHLE VYYAVSGAGM VCHTINPRLF IEQITYVINH AEDKVVFLDD
TFLPIIAEIR GSLPKVKAFV LMAHNNSNAS AQMPGLIAYE DLIGQGDDNY IWPDVDENEA
SSLCYTSGTT GNPKGVLYSH RSTVLHSMTT AMPDTLNLSA RDTILPVVPM FHVNAWGTPY
SAAMVGAKLV LPGPALDGAS LSKLIASEGV SIALGVPVVW QGLLAAQAGN GSKSQSLTRV
VVGGSACPAS MIREFNDIYG VEVIHAWGMT ELSPFGTANT PLAHHVDLSP DEKLSLRKSQ
GRPPYGVELK IVDDEGIRLP EDGRSKGNLM ARGHWVIKDY FHSDPGSTLS DGWFSTGDVA
TIDSDGFMTI CDRAKDIIKS GGEWISTVEL ESIAIAHPHI VDAAVIAARH EKWDERPLLI
AVKSPNSELT SGEVCNYFAD KVARWQIPDA AIFVEELPRN GTGKILKNRL REKYGDILLR
SSSSVCE
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