Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0430 |
Symbol | |
ID | 5108351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 456310 |
End bp | 457467 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640501645 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001185934 |
Protein GI | 146305469 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG TTGTTGTTGG CGCTGGTACA GCTGGAGTAA ATGCTGCGTT CTGGCTTCGT CAATATGGTT ATAAAGGGGA AATTAGGATT TTTAGCAGGG AGTCTGTGGC GCCTTATCAG CGGCCTCCTC TATCCAAGGC TTTTCTGACA AGTGAGATTG CAGAATCCGC AGTGCCATTA AAGCCAGAAG GTTTTTATAC GAATAACAAT ATTACCATTT CGTTAAATAC ACCGATTGTA TCAATCGACG TGGGGCGTAA GATAGTTTCT TCTAAAGATG GAAAAGAATA CGCGTATGAA AAATTGATTC TTGCAACAGG TGCTAGCGCA CGTAGGTTAA CCTGCGAGGG GTCTGAACTG TCTGGGGTCT GCTATTTACG CAGTATGGAA GACGCCAAAG ATTTACGTAG GAAACTTGTG GAGAGTGCGT CTGTTGTTGT GTTGGGCGGC GGAGTAATCG GGCTTGAAGT CGCCTCAGCT GCGGTGGGCT TAGGGAAGAG GGTCACAGTG ATAGAAGCCG CCCCGCGTGT AATGGCGCGC GTGGTTACGC CGGCAGCAGC AAACTTAGTC AGAGCCCGCC TGGAGGCTGA AGGAATTGAG TTCAAGCTGA ATGCGAAATT AACGTCTATA AAGGGCAGGA ATGGCCATGT TGAACAATGC GTACTTGAAA GTGGAGAAGA AATTCAGGCG GATCTGATTG TAGTTGGAAT CGGTGCTATC CCAGAGCTAG AGCTGGCAAC TGAGGCGGCC CTTGAAGTGA GTAATGGTGT TGTGGTCGAT GATCAGATGT GTACATCGGA TACAAGTATA TATGCAATCG GCGACTGCGC AATGGCTAGA AATCCTTTTT GGGGAACGAT GGTACGTTTA GAGACAATTC ATAATGCGGT TACACACGCT CAAATTGTCG CAAGTAGCAT CTGTGGCACA TCAACACCAG CACCAACCCC ACCACGGTTC TGGTCTGATC TTAAAGGGAT GGCGCTGCAA GGACTTGGTG CTCTAAAGGA CTACGATAAA CTCGTTGTTG CAATTAATAA CGAAACTCTT GAACTAGAAG TCCTTGCGTA CAAGCAGGAG CGACTGATTG CAACTGAGAC AATAAATTTG CCTAAACGTC AAGGTGCGCT TGCAGGGAGT ATAAAATTAC CTGATTAG
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Protein sequence | MAIVVVGAGT AGVNAAFWLR QYGYKGEIRI FSRESVAPYQ RPPLSKAFLT SEIAESAVPL KPEGFYTNNN ITISLNTPIV SIDVGRKIVS SKDGKEYAYE KLILATGASA RRLTCEGSEL SGVCYLRSME DAKDLRRKLV ESASVVVLGG GVIGLEVASA AVGLGKRVTV IEAAPRVMAR VVTPAAANLV RARLEAEGIE FKLNAKLTSI KGRNGHVEQC VLESGEEIQA DLIVVGIGAI PELELATEAA LEVSNGVVVD DQMCTSDTSI YAIGDCAMAR NPFWGTMVRL ETIHNAVTHA QIVASSICGT STPAPTPPRF WSDLKGMALQ GLGALKDYDK LVVAINNETL ELEVLAYKQE RLIATETINL PKRQGALAGS IKLPD
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