Gene Pmen_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0430 
Symbol 
ID5108351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp456310 
End bp457467 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content47% 
IMG OID640501645 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001185934 
Protein GI146305469 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG TTGTTGTTGG CGCTGGTACA GCTGGAGTAA ATGCTGCGTT CTGGCTTCGT 
CAATATGGTT ATAAAGGGGA AATTAGGATT TTTAGCAGGG AGTCTGTGGC GCCTTATCAG
CGGCCTCCTC TATCCAAGGC TTTTCTGACA AGTGAGATTG CAGAATCCGC AGTGCCATTA
AAGCCAGAAG GTTTTTATAC GAATAACAAT ATTACCATTT CGTTAAATAC ACCGATTGTA
TCAATCGACG TGGGGCGTAA GATAGTTTCT TCTAAAGATG GAAAAGAATA CGCGTATGAA
AAATTGATTC TTGCAACAGG TGCTAGCGCA CGTAGGTTAA CCTGCGAGGG GTCTGAACTG
TCTGGGGTCT GCTATTTACG CAGTATGGAA GACGCCAAAG ATTTACGTAG GAAACTTGTG
GAGAGTGCGT CTGTTGTTGT GTTGGGCGGC GGAGTAATCG GGCTTGAAGT CGCCTCAGCT
GCGGTGGGCT TAGGGAAGAG GGTCACAGTG ATAGAAGCCG CCCCGCGTGT AATGGCGCGC
GTGGTTACGC CGGCAGCAGC AAACTTAGTC AGAGCCCGCC TGGAGGCTGA AGGAATTGAG
TTCAAGCTGA ATGCGAAATT AACGTCTATA AAGGGCAGGA ATGGCCATGT TGAACAATGC
GTACTTGAAA GTGGAGAAGA AATTCAGGCG GATCTGATTG TAGTTGGAAT CGGTGCTATC
CCAGAGCTAG AGCTGGCAAC TGAGGCGGCC CTTGAAGTGA GTAATGGTGT TGTGGTCGAT
GATCAGATGT GTACATCGGA TACAAGTATA TATGCAATCG GCGACTGCGC AATGGCTAGA
AATCCTTTTT GGGGAACGAT GGTACGTTTA GAGACAATTC ATAATGCGGT TACACACGCT
CAAATTGTCG CAAGTAGCAT CTGTGGCACA TCAACACCAG CACCAACCCC ACCACGGTTC
TGGTCTGATC TTAAAGGGAT GGCGCTGCAA GGACTTGGTG CTCTAAAGGA CTACGATAAA
CTCGTTGTTG CAATTAATAA CGAAACTCTT GAACTAGAAG TCCTTGCGTA CAAGCAGGAG
CGACTGATTG CAACTGAGAC AATAAATTTG CCTAAACGTC AAGGTGCGCT TGCAGGGAGT
ATAAAATTAC CTGATTAG
 
Protein sequence
MAIVVVGAGT AGVNAAFWLR QYGYKGEIRI FSRESVAPYQ RPPLSKAFLT SEIAESAVPL 
KPEGFYTNNN ITISLNTPIV SIDVGRKIVS SKDGKEYAYE KLILATGASA RRLTCEGSEL
SGVCYLRSME DAKDLRRKLV ESASVVVLGG GVIGLEVASA AVGLGKRVTV IEAAPRVMAR
VVTPAAANLV RARLEAEGIE FKLNAKLTSI KGRNGHVEQC VLESGEEIQA DLIVVGIGAI
PELELATEAA LEVSNGVVVD DQMCTSDTSI YAIGDCAMAR NPFWGTMVRL ETIHNAVTHA
QIVASSICGT STPAPTPPRF WSDLKGMALQ GLGALKDYDK LVVAINNETL ELEVLAYKQE
RLIATETINL PKRQGALAGS IKLPD