| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0401 |
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| Symbol | |
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| ID | 5108323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 416778 |
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| End bp | 417674 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501617 |
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| Product | TonB family protein |
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| Protein accession | YP_001185906 |
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| Protein GI | 146305441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CAGCCTCCCC AACCAGCGCG CCCTCCGCCA CCGTCCGACC GGCGGATCGC
CTCGGGTTCA CCCTCTTTCT TGCCGCCGCA CTGCACGTAG CGGTGATTCT TGGCGTCGGC
TTCACCCTGG AGTCGCCACC GGAAATCAGC AAGACACTGG AAATCACCCT GTCCACCTTC
AAGAGCAAAA AAGCACCGGA CAAGGCCGAT TTCCTCGCTC AGGACAACCA GCAAGGCAGC
GGCACCCTGG AGCATACCGC CGCACCGAAG ACCACCGAGC AGGCGCCCTT TCAGGACAGC
GAGGTGCGCA AGGTCACGCC GCCCGCCACG CCGCAGCAGC CCGCCACCCG ACAGGAGGCG
CCCAAGGCCG CCGTCGCCAC CCGCGCCCCG CAGCAGCAGA AGACGCCAGT CAAACGCGAG
GAAGCCAAGC CGGTTGCGAC AACGCGCCCG GCGCCGGTAT TCGACGCTGC CCAACTGTCC
GCCGAGATAG CCAGCCTGGA AGCGGAACTG GCGCAGGAGG TGCAGGCCTA TGCCAAGCGC
CCGAAGATTC ATCGCCTCAA CGCGGCCTCG ACCACGCGCG ACAAGGGCGC CTGGTACAAG
GACGAGTGGC GCAAGAAGGT CGAACGCATC GGCAACCTCA ACTACCCCGA CGACGCCCGC
CGCCAGCGCA TCTATGGCAG CCTGCGCCTG CTGGTGTCGA TCAACCGCGA CGGTTCGCTG
TATGAAGTAC AGGTGCTGGA ATCATCCGGC CAGGCGGTAC TCGACCAGGC CGCGCAACGC
ATCGTGCGCC TGGCCGCGCC CTATGCCCCC TTCACCGGCG ACCTGGCCGA TATCGACCGC
CTGGAAATCA TCCGAACCTG GCGCTTCGAG CGCGGCGATC GACTGTCGAG CAACTAG
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| Protein sequence | MNAAASPTSA PSATVRPADR LGFTLFLAAA LHVAVILGVG FTLESPPEIS KTLEITLSTF
KSKKAPDKAD FLAQDNQQGS GTLEHTAAPK TTEQAPFQDS EVRKVTPPAT PQQPATRQEA
PKAAVATRAP QQQKTPVKRE EAKPVATTRP APVFDAAQLS AEIASLEAEL AQEVQAYAKR
PKIHRLNAAS TTRDKGAWYK DEWRKKVERI GNLNYPDDAR RQRIYGSLRL LVSINRDGSL
YEVQVLESSG QAVLDQAAQR IVRLAAPYAP FTGDLADIDR LEIIRTWRFE RGDRLSSN
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