| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0395 |
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| Symbol | |
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| ID | 5108317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 410576 |
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| End bp | 412483 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501611 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_001185900 |
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| Protein GI | 146305435 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.518551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCT TACCTGTGAT CGTAGGTTTT GGGGGTTACA ACGCAGCCGG GCGCAGCTCC
TTCCACCATG GTTTTCGCCG TACCGTGCAG GAGTCGCTGG AACCCCAGGC GCGCCAGGAA
ACCCTGGCCG GGCTGGCGCA GATGATGAAG CTGGTGCGCG TGGTCGATGG CCAGTATCAG
GATCAGGACG GCCAAGCACT GAGCCTGGCC GAGATCGAAA GCCGCTACGG CAAGCAGATT
CTCGCCGGCA CTCTGGTGCG CCGCATCGAG AAGCAGCACC TGGACCCGGA CGCCGCCCAC
TGGCAGAAGA GCATCGACGT CGCTCCCGCC AATGGTGCCA ACCTGAGCTT CATCACTCAG
CGCAAGCAAC TGCCCGAGCC GCTGCCGGCC AATTGGTCGA TCGAAGAGCT CGACGGCAAC
GAAGTACGCG TCACCCTGCA CGACAGTTGC GAATTCAAGG TCGACAGCTA TCGCCCGCTG
GCGGTGAAGT CCGCCGGCCA GCTGCCCACC GGCTTCGAAC CGAGCGAGCT GTACAACTCG
CGTTTCCATC CGCGCGGCCT GGCCATGACA GTGGTCGGCG TCACTGACGC GCTGCGTTCG
GTGGGCATCG ACTGGCAGCG CATCGTTCAG CACGTTGCCC CGGACGAAAT CGCCGTGTTT
GCCAGCTGCA TCATGAGCCA GCTCGACGAG AACGGCTTCG GCGGCATGAT GCAGTCGCGC
CTGAAAGGCG GCCGCGTTAC CGCCAAGCAG CTGGCCCTGG GCCTCAATAC CATGCCGGCG
GACTTCATAA ACGCCTACGT GCTCGGCAGC GTCGGCACCA CCGGTAGCAT CACCGGCGCC
TGCGCCACCT TCCTCTACAA CCTGCAGAAG GGCATCGAGC AGATCGCCAG CGGCAAGGCA
CGCGTGGTGA TCGTCGGCAG CAGCGAGGCG CCGATCAACC AGGAATGCAT CGAGGGCTAC
GGCGCCATGG GCGCACTGGC CACCGAGGAA GGCCTGCGCC AGATCGAAGG CAAGAGCGAC
GTGGACTTCC GCCGCGCCAG CCGCCCGTTC GGCGACAACT GCGGCTTCAC CCTGGCCGAG
GCCTGCCAGT TCGTGGTGCT GATGGACGAC GAACTGGCCT TGGAACTGGG CGCCGACATT
CACGGCGCGG TGCCGGACGT GTTCATCAAC GCCGATGGCT TCAAGAAATC CATTTCCGCC
CCCGGCCCAG GCAACTACCT GACCGTGGCC AAGGCCGTGG CCAGCGCCGT GCAGCTGCTC
GGCCTGGACG CCGTGCGCAA CCGCAGCTTC GTCCACGCCC ATGGTTCCAG CACCCCGGCC
AACCGCGTTA CCGAGTCGGA GATTCTCGAC CGCGTCGCCG CCGCCTTCGG TATCGAACAG
TGGCCGGTCA CCGCAGTGAA GGCCTTCGTC GGCCACTCCC TGGCCACCGC CAGCGGCGAC
CAGGTGATCG CTGCGCTCGG CGCCTTCAAG TACGGCATCG TGCCAGGCCT GAAGACCATC
GATGCGGTCG CCGCTGACGT GCATCAGGCT CATCTGAGCC TGTCCACCAT CGATCGCAAA
GTGGGTGAGC ACGCGCTGGA CGTGGCCTTC ATCAACTCCA AGGGCTTTGG CGGCAACAAT
GCCAGCGCCC TGGTACTGGC CCCGCACGTG GTCGAGCGCA TGCTGCGCAA GCGCCACGGC
CAGGCCGCCT TCGACGCCTA CCTGGCGCGC CGCGAGGGCA CCCGCGCTGC CGCAGCCGCC
TACGACCAGC AGGCGCTGCA AGGCAAGCTG GACATCATCT ACAACTTCGG CAACGACATG
ATCGACGACC AGGCGATCTC CATCACCACC GAGGAAGTGA AGGTGCCCGG CTTCGACCAG
CCACTGGTGT TCAGGAAGGA CGAGCGCTAC AGCGATATGC TCGATTGA
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| Protein sequence | MSRLPVIVGF GGYNAAGRSS FHHGFRRTVQ ESLEPQARQE TLAGLAQMMK LVRVVDGQYQ
DQDGQALSLA EIESRYGKQI LAGTLVRRIE KQHLDPDAAH WQKSIDVAPA NGANLSFITQ
RKQLPEPLPA NWSIEELDGN EVRVTLHDSC EFKVDSYRPL AVKSAGQLPT GFEPSELYNS
RFHPRGLAMT VVGVTDALRS VGIDWQRIVQ HVAPDEIAVF ASCIMSQLDE NGFGGMMQSR
LKGGRVTAKQ LALGLNTMPA DFINAYVLGS VGTTGSITGA CATFLYNLQK GIEQIASGKA
RVVIVGSSEA PINQECIEGY GAMGALATEE GLRQIEGKSD VDFRRASRPF GDNCGFTLAE
ACQFVVLMDD ELALELGADI HGAVPDVFIN ADGFKKSISA PGPGNYLTVA KAVASAVQLL
GLDAVRNRSF VHAHGSSTPA NRVTESEILD RVAAAFGIEQ WPVTAVKAFV GHSLATASGD
QVIAALGAFK YGIVPGLKTI DAVAADVHQA HLSLSTIDRK VGEHALDVAF INSKGFGGNN
ASALVLAPHV VERMLRKRHG QAAFDAYLAR REGTRAAAAA YDQQALQGKL DIIYNFGNDM
IDDQAISITT EEVKVPGFDQ PLVFRKDERY SDMLD
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