| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0391 |
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| Symbol | |
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| ID | 5108313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 407489 |
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| End bp | 408313 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501607 |
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| Product | formate dehydrogenase family accessory protein FdhD |
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| Protein accession | YP_001185896 |
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| Protein GI | 146305431 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACC GTACCGCCGA CCCGCTTACC GATGATCGCG CCGCCGCTCC GGCGCCGGAC
GGTTACGCCT ATGTCGAGCT GGACGAGACG GCGCACCATG GTCACGCCGT GCTGGCCGAG
GAATGCGCCC TGGCCATCGC CTACAACGGC ATCAGCCATG CGGTGATGAT GGTGTCGCCC
AGTGCGCTGG AGGACTTCGT CGTCGGCTTC AGCCTGACGT CTGCAGTCGT GGCGGCGGCC
GAGGACATCT ACGACATCCA GCTCAAGCGT GCGGGTGAGG CGTTCAGTGC CGAGGTGGAG
ATTGCCAGTC GTGCCTTCTG GGCGCTCAAG CAGCAGCGGC GCAATCTGGC CGGTACCAGT
GGTTGCGGCC TGTGCGGCGT CGAGGCGCTG GAGCAGGCGC TGCCGCAACT CGACACCCTG
AGCCTCAACC CGCTGCCACC GGCCGCGCAC CTGGCCGACC TGCGTACGCG CATCGGCGAG
GTGCAGAAGC TGGCGCGCCA GAGCGGCGCG CTGCATGCTG CGCTGTTCGT CGACGAGTCT
GGTGAGATCG TCCTGTGCCG CGAAGACATT GGCCGGCACA ACGCGCTGGA CAAGCTGATC
GGCGCGCTAA ACCGTGAAAG CCGCGACGCC CGCCGCGGCT TTGCCGTGGT CACTAGTCGC
TGCAGCCTGG AGCTGATTCA CAAGGCGGTG CGCGCCGGCT TCGCCAGCCT GGTCAGCCTG
TCGGCGCCCA CCGATCTGTG CGTGCGCTGG GCACGCCGGC ACCGTCTCAA CCTCATCCAC
CTGCCGCACC ATAGTCCACC GCGGGTCTAT AGCCCGGCGC CGTAG
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| Protein sequence | MSHRTADPLT DDRAAAPAPD GYAYVELDET AHHGHAVLAE ECALAIAYNG ISHAVMMVSP
SALEDFVVGF SLTSAVVAAA EDIYDIQLKR AGEAFSAEVE IASRAFWALK QQRRNLAGTS
GCGLCGVEAL EQALPQLDTL SLNPLPPAAH LADLRTRIGE VQKLARQSGA LHAALFVDES
GEIVLCREDI GRHNALDKLI GALNRESRDA RRGFAVVTSR CSLELIHKAV RAGFASLVSL
SAPTDLCVRW ARRHRLNLIH LPHHSPPRVY SPAP
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