Gene Pmen_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0387 
Symbol 
ID5108309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp401979 
End bp402473 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID640501603 
ProductNADH dehydrogenase (ubiquinone), 24 kDa subunit 
Protein accessionYP_001185892 
Protein GI146305427 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTC TTCCCCAGCG CTTCGCCCCC GAGCAGTGCG AGGCCGTCAC CCGTGAGGTG 
CTCGCCGCCC ACCGCGGCCA GCCCGGCGCC CTGCTACCCA TCCTCCACGA TATCCAGGAC
CGCCTCGGCG CCGTACCGCC CGAGCTGTTG CCGCTGATCG CCGAGGACCT CTGCCTGTCG
CGTGCCGAGG TGCACGGGGT GGTCAGCTTC TACCACGATT TCCGCGCCAC GCCGCCCGGC
CGCCAGGTGC TCAAGCTGTG TCAGGCCGAG GCCTGCCAGT CGATGGGGGT CAAGGCGCTG
ACCGCTGAGC TGGAAAGCAA GCTCGGCCTG CCGCTGGGTG AGACCCGCGA GGACGGCAGC
CTCAGTTTCG AACCGGTGTA CTGCCTGGGC AACTGCGCCT GCGCACCGAG CGTGATGCTC
AATGGCGAAC TGCACGGTCG TGTCGACGCC GAGGAAGTGC TGGCGCTGCT GGCCGAACAG
GGGGGCCAGG CATGA
 
Protein sequence
MALLPQRFAP EQCEAVTREV LAAHRGQPGA LLPILHDIQD RLGAVPPELL PLIAEDLCLS 
RAEVHGVVSF YHDFRATPPG RQVLKLCQAE ACQSMGVKAL TAELESKLGL PLGETREDGS
LSFEPVYCLG NCACAPSVML NGELHGRVDA EEVLALLAEQ GGQA