| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0379 |
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| Symbol | |
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| ID | 5108301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 393360 |
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| End bp | 394601 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501595 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001185884 |
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| Protein GI | 146305419 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG TCGTCTCGCC GCTTCGCTGT GCCGCCGTGA TTGGCGCCGG CACCATGGGC
CGCGGCATCG TCATCAGCCT GGCCAATGCC GGCCTGCGTG TGCTGTGGCT GGACAACAAC
CCGCAGATGG TCGAGCAGGG CCTGGGGATG GCCGAGGACA CCTGGGCGCA CAACGTCGCC
AAGGGCCGCA TCGATGCGGC CGAGGCCGCA GCGCGACGGG CGCGGGTCGA GGCGGTGGAC
GGCTACGCGG CGCTGGCCGA TGCCGATCTG GTGATCGAGG CGGTGTACGA GAATCTCGAG
CTCAAGCAAC GCATATTCCG CGAGCTGGAC GCGGTGATGA AGCCCGGCGC CATCCTCGCC
AGCAATACCT CGGCGCTGGA TATCGACGCC ATCGCCGCCG TCACCGCGCG GCCGGAAGCC
GTGCTGGGCC TGCACTTCTT CAGCCCGGCG CACATCATGA AGCTGCTGGA GATCGTGCGT
GGCGGCAAGA CCGCGCCGGC CGTGCTGCAG GCCGCGCAGG AGCTGGGCGA GCGCATGGGC
AAGGTGGCGG TGGTGGCCGG CAACTGCCAC GGCTTTATCG GCAACCGCAT GCTGCATACC
TACGTGCGCG AGGCGCGCAT GCTGCTGCTC GAAGGCGCCT GGCCGCACCA GGTGGACGCG
GCGCTGCAGG GCTTCGGCTT CGCCATGGGG CCGTTTCGCA TGTATGACGT GGTCGGCATC
GACCTGGAAT GGCGCGCCCG CGAGCTGGCC GGCCAGGGTC AGGACGATGC GGCGGTGCAG
GTGGACAACC GCCTGTGCGA GCTGGGTCGC TTCGGCCAGA AGAGCGGCCA GGGCTATTAC
CGCTACGCAC CCGGCAGCCG CCAGGCCGAG CACGATCCCG AGGTGGACGC GCTGGTTCAG
GCCGAGTCCG AACGCCTCGG CTTCACCCGC CGCGATATCG GCACCGAGGA GATTCTCGAG
CGCTGCCTGC TGGCGCTGGT CAACGAGGGG GCGAAGATTC TCGAGGAGAA CATCGCCGCC
AACAGCCGCG ACATCGATCT GGTGTATCTG AACGGTTACG GCTTTCCCGC CGAGCGTGGC
GGCCCGATGG CCTGGGCCGA CGGCGAGGGT GTCGCGGCGA TTCATCGGCG CCTGCTGCAA
CTGACCGAGC GTTTCGGCGC GCACTGGCAG CCGGCGCCGC TGATCGAGCG CCTGGCCGCG
GAGAACAAGC ATTTCAGCGA CGTACAGGAG GGCCGGGTAT GA
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| Protein sequence | MTQVVSPLRC AAVIGAGTMG RGIVISLANA GLRVLWLDNN PQMVEQGLGM AEDTWAHNVA
KGRIDAAEAA ARRARVEAVD GYAALADADL VIEAVYENLE LKQRIFRELD AVMKPGAILA
SNTSALDIDA IAAVTARPEA VLGLHFFSPA HIMKLLEIVR GGKTAPAVLQ AAQELGERMG
KVAVVAGNCH GFIGNRMLHT YVREARMLLL EGAWPHQVDA ALQGFGFAMG PFRMYDVVGI
DLEWRARELA GQGQDDAAVQ VDNRLCELGR FGQKSGQGYY RYAPGSRQAE HDPEVDALVQ
AESERLGFTR RDIGTEEILE RCLLALVNEG AKILEENIAA NSRDIDLVYL NGYGFPAERG
GPMAWADGEG VAAIHRRLLQ LTERFGAHWQ PAPLIERLAA ENKHFSDVQE GRV
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