| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0374 |
|---|
| Symbol | |
|---|
| ID | 5108296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 388088 |
|---|
| End bp | 389575 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640501590 |
|---|
| Product | flavoprotein involved in K+ transport-like protein |
|---|
| Protein accession | YP_001185879 |
|---|
| Protein GI | 146305414 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTG AACATCTGGA TGTCCTGATC ATCGGCGCCG GCCTCTCCGG AGTAGGCGCC
GCCTGCCATC TCAAGCGCCT TTGCCCGGGC AAGCGTTTCG CCCTTCTCGA AGGGCGCGAG
GCCATGGGTG GCACCTGGGA TCTGTTTCGC TATCCGGGGA TCCGCTCCGA CTCGGACATG
TACACACTTG GCTACAACTT CAAGCCATGG ACCGATCCGC AGGCCATCGC CGACGGCCCG
TCGATCCGTC GCTACATCGA GGAAACCGCC CGCGAGTATG GCGTCGATGG CCTGATTCGT
TATCGGCACA GGGTACTCAA GGCGGACTGG TGCAGCGCCA GCGCCACCTG GCAATTGCTG
GTGCAGCGCG GCGAGGACAG CGAGCCGCTG CGCATGAGCT GCCAGTTCCT GATGATGTGC
ACCGGCTACT ACCGCTACGA GGCCGGCTAC ACCCCCGAGT TCGCCGGGCG CGAGGACTAC
CGCGGCACCT TCATCCATCC GCAGCTGTGG CCCGAGGGTT TCGATTACGA CGGCAAGCGC
ATCCTGGTGA TCGGCAGCGG CGCCACGGCG GTGACCCTGG TGCCGGCGCT GGCCGAACGC
GCGGCGCAGG TCACCATGCT GCAGCGTTCG CCCAGCTACG TGATCAACCT GCCGCAGCGC
GATGCGCTGT CCAATGCGCT GCGGCGCGTG TTGCCGGAGA AATGGGTGTA TCGCCTGGCA
CGTGGGCGCA ACGTGACCCT GCAGCTGGTC TTCTACAAGC TGGCCAAGCG TTTTCCCAAT
CTGGTGCGAC GCGTCCTGCT GGGGCTGGTG CGGCGCCAGC TGGGCGAGCG GGTCGATCTG
CGCCATTTCA GCCCGTCCTA CAAACCGTGG GACCAGCGCG TCTGTGCGGT GCCCGATGGC
GACCTGTTCC GCGTGCTGCG CCAGGGCAAG GCGCAGGTGG TCACCGCCGA GATCGAGCGT
TTCACCGCGC AGGGGATTCG CCTGAAGAAC GGCGAAGAGC TGGCTGCCGA CGTGATCGTC
AGCGCCACCG GCCTGCAGTT GCAGCTGTTC GGCGGCATCG AGGTGCAGGT CGACGGCGTG
CCCTTCGAGG CGCCCAAAAG CATGGGCTAC CGCGGCATCA TGCTGCGCGA TCTGCCCAAC
CTGGCAGTGG TGATGGGCTA CACCAATGCC AGCTGGACGC TCAAGGCCGA TCTTTCCAGC
GAGTACTTCT GCCGCCTGAT CAGGCACATG GACGCCATCG GCAGGCGCCA GGTGACGCCG
CGGGCCGGCG ACGGCACGGT GCGCCCCGAG CCCTTTCTCG ATCTGCAGTC GGGCTACATC
GAGCGCGCCG CGCACCTGTT GCCGGCTCAG GGCGACCGCG CGCCCTGGAA GCTGCATCAG
AACTACCTGC TCGACCTGGC GCTGCTGCGT TATGGCCGGG TGGACGACGG TTATCTGCTG
TTTTCCGCGC CGCACGCCGC GCAGCAGGCG GCGGTCGCTC AGCTCTGA
|
|---|
| Protein sequence | MSVEHLDVLI IGAGLSGVGA ACHLKRLCPG KRFALLEGRE AMGGTWDLFR YPGIRSDSDM
YTLGYNFKPW TDPQAIADGP SIRRYIEETA REYGVDGLIR YRHRVLKADW CSASATWQLL
VQRGEDSEPL RMSCQFLMMC TGYYRYEAGY TPEFAGREDY RGTFIHPQLW PEGFDYDGKR
ILVIGSGATA VTLVPALAER AAQVTMLQRS PSYVINLPQR DALSNALRRV LPEKWVYRLA
RGRNVTLQLV FYKLAKRFPN LVRRVLLGLV RRQLGERVDL RHFSPSYKPW DQRVCAVPDG
DLFRVLRQGK AQVVTAEIER FTAQGIRLKN GEELAADVIV SATGLQLQLF GGIEVQVDGV
PFEAPKSMGY RGIMLRDLPN LAVVMGYTNA SWTLKADLSS EYFCRLIRHM DAIGRRQVTP
RAGDGTVRPE PFLDLQSGYI ERAAHLLPAQ GDRAPWKLHQ NYLLDLALLR YGRVDDGYLL
FSAPHAAQQA AVAQL
|
|---|
| |