| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0369 |
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| Symbol | |
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| ID | 5108291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 382505 |
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| End bp | 384433 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501585 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001185874 |
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| Protein GI | 146305409 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TCAAACGCGT CTTCGGTTTC GATCAGCTGC GTCCCGGCCA GGAGGCGGTG
ATCAGCGCCG TGCTCGCCGG TCGTTCGGCG GCGGCGATCT TTCCCACGGG CTCGGGCAAG
TCCCTGTGCT ACCAGTTGCC GGCGCTGCAC CTGCCGCATC TGACCCTGGT GATCTCACCG
CTGCTGGCGC TGATGCAGGA TCAGCTGGCC TTCCTGCACG CCCATGGTAT CGCGGCAGCG
AGCATCGACT CGGCGCAGAC CCGCGAGCAG GCCGCCGAGG TGATGAACCG GGCACGCAGC
GGCGAGCTGA AGATTCTGAT GATCTCGGTG GAGCGCCTGA AGAACGAGCG CTTCCGAAAT
TTCATCGCCC AGGTGCCGAT CTCCCTGCTG GTGGTCGACG AAGCGCACTG CATTTCCGAG
TGGGGCCACA ACTTCCGCCC GGATTACCTC AAGCTGCCCG ACTATCAGCG CCAGTTCGGC
ATCAAGCAGG TGCTGCTGCT CACCGCCACG GCCACGCCCA GGGTGATCGC CGACATGCGC
GAGAAATTCG CCATCGCCGA GGCGGATGTG GTCACCACCG GCTTCTACCG GCCCAATCTC
AATCTGCTGG TAGAGCCGGT GCCTGGCGGT GCCAAGACGC AGCGCCTGCA GCAATGGCTG
GCGCCGCGGC GTGGTCAGGC GAGCATCGTC TACGTCACTC AGCAGAAGAC CGCCGAACAG
GTCGCCGAGC GTCTGGCGCG TGACGGTTTG GCGGTCAGCG CCTACCACGC CGGCATGGCC
CATGAGGTAC GCGAGTCGAT CCAGCGGCGC TTCATGGCCG GCGAGCTGGA GTGCATCGTC
GCCACCATCG CCTTCGGCAT GGGCATCGAC AAGCGCGATA TCCGCAACGT GGTGCACTTC
GACCTGCCCA AGTCGGTGGA GAACTACAGC CAGGAAATCG GCCGCGCCGG GCGCGATGGC
CAGGCCTCGG ACTGCCTGGT GCTGGCCAGC CGCGACGGTC TTAGCGTGCT GGAGAACTTC
GTCTATGGCG ATACGCCGGA GCTTGCCGGC ATTCGCGCCG TGCTCGACGA CCTGCGCGCG
GTCGGTACGG GCGGGCAGTG GGAGCTGATG CTCGGTCAGC TCTCCGAGCA CAGCAATATC
CGTGCGCTGC CGCTCAAGAC CCTGCTGGTG CAGCTGGAAC TACGCGGCAT CATCGCGCCG
CGTTATGCCT ACTTCGCCGA GTATCGCTTC AAGCTGCTGC TGGAGGACGA GGCCTTGCTG
GCGCAGTTCG AGGGCGAGCG GCGCCAGTTC GTCGAGGCGA TCCTTGCCTG CTCGAAGCGT
GCGCGTACCT GGTCGACGCT GGATTTTGAC GCGCTGTATC GACAGCACGG CGCCGAGCGC
GCGCGGGTGG TCAAGGCGCT GGACTACTTC CAGGAAAGAG GCTGGCTGGA GCTGGAAAGC
AAGCAGATGA CCGAGGTCTA CGCCGTGCTC GATGGCGGTT TCGAGGTCGA AGCCCTGGCC
GATGACCTGC ATGCGCACTT CCGCGCCCAT GAAGCCAGCG AGATCGCCCG TATCCAGGCC
ATGCTCGCCC TGTTCGAGAG CCGCGAATGC CTGAGCCGCC GTCTGGCGCT GTACTTCGGC
GACGAACAGG CGCCCGAGCG CTGCGGGCAT TGTTCGGTGT GTCAGGGGCG CGTCGCGACC
CTGCCGCCAC CACCGGAATT ACCGCCCTTG AGCGGACGAA ATGCCCAGGC GTTGTGCGCC
GCCTTCGTCG AGAAGCACCT GCAGCATGCC GGTTGCACAC CGAGCCAAGA GTGCCTGACG
CGCTTTCTCT GCGGCGTGAC CACGCCGCTG CTGACCAAGC TCAAGGCGCG CCAGCTGGCC
GGCTTCGCTG CATTGGAGGA GTACCCCTAC GCCGAAGTGC GCGGTTGGTT GACGGCGTCG
TTCACGTAG
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| Protein sequence | MSTLKRVFGF DQLRPGQEAV ISAVLAGRSA AAIFPTGSGK SLCYQLPALH LPHLTLVISP
LLALMQDQLA FLHAHGIAAA SIDSAQTREQ AAEVMNRARS GELKILMISV ERLKNERFRN
FIAQVPISLL VVDEAHCISE WGHNFRPDYL KLPDYQRQFG IKQVLLLTAT ATPRVIADMR
EKFAIAEADV VTTGFYRPNL NLLVEPVPGG AKTQRLQQWL APRRGQASIV YVTQQKTAEQ
VAERLARDGL AVSAYHAGMA HEVRESIQRR FMAGELECIV ATIAFGMGID KRDIRNVVHF
DLPKSVENYS QEIGRAGRDG QASDCLVLAS RDGLSVLENF VYGDTPELAG IRAVLDDLRA
VGTGGQWELM LGQLSEHSNI RALPLKTLLV QLELRGIIAP RYAYFAEYRF KLLLEDEALL
AQFEGERRQF VEAILACSKR ARTWSTLDFD ALYRQHGAER ARVVKALDYF QERGWLELES
KQMTEVYAVL DGGFEVEALA DDLHAHFRAH EASEIARIQA MLALFESREC LSRRLALYFG
DEQAPERCGH CSVCQGRVAT LPPPPELPPL SGRNAQALCA AFVEKHLQHA GCTPSQECLT
RFLCGVTTPL LTKLKARQLA GFAALEEYPY AEVRGWLTAS FT
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