| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0363 |
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| Symbol | |
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| ID | 5108285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 376760 |
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| End bp | 377665 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501579 |
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| Product | SSU ribosomal protein S6P modification protein |
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| Protein accession | YP_001185868 |
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| Protein GI | 146305403 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG CCGTGCTGTC GCGCAATCCG CGTCTGTATT CCACCCGACG CCTGGTGGAG
GCCGGTCAGC AGCGGGGCCA TGAGATGCAG GTGATCGATA CCCTGCGCGC CTACATGAAC
ATCGCCAGCC ACAAGCCGCA GATCCACTAT CGCGGCCGGG CGCTGGAAGG CTTCGATGCG
GTGATCCCGC GCATCGGCGC CTCGGTGACC TTCTATGGCT GCGCGGTGTT GCGCCAGTTC
GAGATGATGG GTGTCTACCC GCTCAACGAG TCGGTGGCCA TCAGCCGCTC GCGCGACAAG
CTGCGCGCCC TGCAACTGCT GTCGCGCAAG GGCATCGGCC TGCCGGTGAC CGGTTTTGCC
CACTCCCCCG ACGACATTCC CGACCTGATC CAGATGGTCG GCGGCGCGCC GCTGGTGATC
AAGGTGCTGG AAGGCACCCA GGGCATGGGC GTGGTGCTGG CCGAGACCAC CAAGGCCGCC
GAATCGGTGA TCGAAGCCTT CTTCGGCCTC AAGCAGGACA TCATGGTCCA GGAGTACATC
CAGGAAGCCG GCGGCGCCGA CATTCGCTGC TTCGTGGTCG GCGACAAGGT GATCGCTTCG
ATGAAGCGCC AGGCCAAGGC CGGCGAGTTC CGCTCCAACC TGCATCGCGG CGGCAGCGCC
AGCCTGATCA AGATCACCCC CGAAGAGCGC ATGACCGCGG TGCGTGCGGC CAAGGTCATG
GGCCTGAACG TCGCCGGGGT GGACATCCTG CGCTCCAACC ACGGCCCGCT GGTGATGGAG
GTCAACTCCT CGCCGGGCCT GGAAGGCATC GAGACCACCA CCGGCAAGGA CGTCGCCGGG
ATGATCATCC AGTACCTGGA AAAGAACGCC GAACCCGGCC AGACCCGCAC CAAGGGTCGC
GGATGA
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| Protein sequence | MKIAVLSRNP RLYSTRRLVE AGQQRGHEMQ VIDTLRAYMN IASHKPQIHY RGRALEGFDA
VIPRIGASVT FYGCAVLRQF EMMGVYPLNE SVAISRSRDK LRALQLLSRK GIGLPVTGFA
HSPDDIPDLI QMVGGAPLVI KVLEGTQGMG VVLAETTKAA ESVIEAFFGL KQDIMVQEYI
QEAGGADIRC FVVGDKVIAS MKRQAKAGEF RSNLHRGGSA SLIKITPEER MTAVRAAKVM
GLNVAGVDIL RSNHGPLVME VNSSPGLEGI ETTTGKDVAG MIIQYLEKNA EPGQTRTKGR
G
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