Gene Pmen_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0360 
Symbol 
ID5108282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp370677 
End bp371993 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content68% 
IMG OID640501576 
Productosmolarity sensor protein envZ 
Protein accessionYP_001185865 
Protein GI146305400 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC CCTACTGGTT CCCGCAAAGC TTCTTCGCCC GCACCCTGTG GCTGGTGCTC 
ATCGTCGTGC TGTTCTCCAA GGCGCTGACC CTGGTGTACC TGATGATGAA CGAGGACGTG
CTGGTCGACC GCCAGTACAG CCATGGCGCG GCCCTGACCC TGCGGGCCTA CTGGGCGGCC
AACCCCGAGG ATCGCGACCA CATCGCCCAG GCCGCCGGGC TCAAGCGCAT CCCGCGTGAC
AAGGTGCCGG CCAGCGAGCA GCACTGGCCC TACAGCGAAA TCTTCCAGCG GCAGATGCAG
ACCGAACTCG GCCCGGACAC GGAAACGCGG GTGCGCGCGA CCTCGCCACC GGCGCTGTGG
GTGCATGCAC CGAGCCTCGG CGATGGCTGG GTACGCGTGC CGATGTACCC GCACCCGCTG
CGTGGTCAGC GGATCTGGAG CGTGCTCGGC TGGTTCCTCG GCATCGGCCT GTTGTCCACC
GCAGCGGCCT GGATCTTCGT GCGCCAGCTC AACGCACCGC TCAAGCGTCT GGTCTTCGCC
GCGCGCCAGC TCGGCCAGGG GCGCAGCGTA CGGCTGCCGG TGGGCGATAC GCCGAGCGAG
ATGACCGAGG TGTACCGCGC CTTCAACCAG ATGGCCGAGG ATGTCGAGCA GGCCGGCCGC
GAGCGCGAGC TGATGCTGGC CGGCGTGTCC CACGACCTGC GCACGCCGCT GACCCGCCTG
CGTCTGGCCC TGGAATTCAT GCAGAGCGAC TCCGAGCTGA CCGAAGACAT GGTGCGCGAC
ATCGAGGACA TGGACGCCAT TCTCGATCAG TTCCTCGCCT TCATCCGCGA CGGGCGTGAC
GAGCCGGTGG AGGAGCTGGA CTTCGCCGAG CTGGTACGCG AAACCCTGGC GCCCTACAAC
CAGAATGGCG AGCGCGTGCG CCTGTGCCTC GAGCCGATCC CGCCTTTCCC GCTGCGCCGG
GTGTCGACCA AGCGCCTGCT CACCAATCTG GTGGAGAACG CGCTCAACCA CGGTGGTGGC
GATGCCGTGG AGGTGGTGGC CAGCCTGGCT GGCGATCACA GTGCGCCCTA TGTGGTGCTG
AGCGTGCTGG ATCGCGGCAA CGGCATCGAT CCGGCGGAGC TGGACAGCAT CTTCAACCCC
TTCATCCGCG GTGATCGGGC CCGCGGCGGG CGTGGTACCG GCCTGGGGCT GGCCATCGTC
AAGCGCATCG CCGCGCTGCA TGGCGGCAGC GTCGAGCTGC GCAACCGCAG TGGCGGGGGG
CTGGAGGCAC GTGTGCGTCT GCCGTTGGGG CTGCTGCTGC CGCGCGATGC GGTCTAG
 
Protein sequence
MKAPYWFPQS FFARTLWLVL IVVLFSKALT LVYLMMNEDV LVDRQYSHGA ALTLRAYWAA 
NPEDRDHIAQ AAGLKRIPRD KVPASEQHWP YSEIFQRQMQ TELGPDTETR VRATSPPALW
VHAPSLGDGW VRVPMYPHPL RGQRIWSVLG WFLGIGLLST AAAWIFVRQL NAPLKRLVFA
ARQLGQGRSV RLPVGDTPSE MTEVYRAFNQ MAEDVEQAGR ERELMLAGVS HDLRTPLTRL
RLALEFMQSD SELTEDMVRD IEDMDAILDQ FLAFIRDGRD EPVEELDFAE LVRETLAPYN
QNGERVRLCL EPIPPFPLRR VSTKRLLTNL VENALNHGGG DAVEVVASLA GDHSAPYVVL
SVLDRGNGID PAELDSIFNP FIRGDRARGG RGTGLGLAIV KRIAALHGGS VELRNRSGGG
LEARVRLPLG LLLPRDAV