Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0347 |
Symbol | |
ID | 5110316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 355639 |
End bp | 356793 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640501563 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001185852 |
Protein GI | 146305387 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.89864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCG CTTCCAGCGC CTACAAAAAA GCCCTCGAGG GAAACCAGAC ACCGAAAGAG GTGCTGGTCA AGATCGATCG GGTAACCAAG AAATTCGACG AGACAGTGGC AGTCGACGAC GTATCGCTGA CCATCAACAA GGGTGAGATC TTCGCCCTGC TCGGTGGCTC GGGATCGGGC AAATCCACGC TGCTGCGCAT GCTCGCCGGC TTCGAGCGGC CCACCGAGGG ACGCATCATC CTCGACGGTG TGGACATCAC CGACATGCCG CCCTACCAGC GGCCGATCAA CATGATGTTC CAGTCCTACG CGCTGTTCCC GCACATGACC GTGGCGCAGA ACATCGCCTT CGGTCTCAAG CAGGACAAGC TGCCCCAGGC CGAGATCGAC GAGCGCGTGG CCGAGATGCT CAAGCTGGTG CACATGACCC AGTACGCCAA GCGCAAGCCG CATCAACTCT CGGGCGGTCA GCGTCAGCGC GTGGCCCTGG CCCGTTCCCT GGCCAAGCGT CCCAAGCTGC TGCTGCTCGA CGAGCCGATG GGCGCGCTGG ACAAGAAGCT GCGCTCGCAG ATGCAGCTGG AGCTGGTGGA GATCATCGAG CGCGTCGGCG TGACCTGCGT GATGGTCACC CACGACCAGG AAGAGGCCAT GACCATGGCC CAGCGCATCG CCATCATGCA CCTGGGCTGG ATCGCCCAGA CCGGCAGCCC GGTGGACATC TACGAGACGC CGACCAGCCG CCTGGTGTGC GAGTTCATCG GCAACGTCAA CCTGTTCGAC GGCCAGATCG TCAGCGATGA AGCCGACCAC GCGATCATCG ATTGCCCGCA GCTGGACAAG CCGATCTACA TCGGCCATGG CGTCAGTACC CGTGCCGAGG ACAAGAAGGT CAGCTACGCC CTGCGCCCGG AAAAACTGCT GATGGCCACC GCCTTGCCGG CCGACCATGA GCACCCCGAG TACAACTGGA GCCGTGGCCA CGTGCACGAC ATCGCCTACC TCGGCGGCCA TTCGGTGTAC CACGTCAAGC TCAGCTCCGG GCAGATCGTG CAGTGCTTCA TCGCCAACGC CGAGCGCCGC GGCAAGCGCC CGACCTGGGA CGATCCGGTG GTGGTGTACT GGGAAGACGA CAGCGGCGTG GTACTGCAAT CATGA
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Protein sequence | MAVASSAYKK ALEGNQTPKE VLVKIDRVTK KFDETVAVDD VSLTINKGEI FALLGGSGSG KSTLLRMLAG FERPTEGRII LDGVDITDMP PYQRPINMMF QSYALFPHMT VAQNIAFGLK QDKLPQAEID ERVAEMLKLV HMTQYAKRKP HQLSGGQRQR VALARSLAKR PKLLLLDEPM GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA QRIAIMHLGW IAQTGSPVDI YETPTSRLVC EFIGNVNLFD GQIVSDEADH AIIDCPQLDK PIYIGHGVST RAEDKKVSYA LRPEKLLMAT ALPADHEHPE YNWSRGHVHD IAYLGGHSVY HVKLSSGQIV QCFIANAERR GKRPTWDDPV VVYWEDDSGV VLQS
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