| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0345 |
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| Symbol | |
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| ID | 5110314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 353332 |
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| End bp | 354426 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501561 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185850 |
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| Protein GI | 146305385 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.742207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGTT CTATCCTGCT GGCCGGCCTT GTCGCCGCCG CCATTGGCAT GTCCGCAGCC
CAGGCGGCCA ATCGTGTGGT CAAGGTCTAC AACTGGTCCG ACTACATTGC GCCGGACACC
ATCGCCGAGT TCGAGAAGGA AACCGGCATC AAGGTGGTGT ATGACGTTTT CGACTCCAAC
GAAACCCTCG ATGGCAAGCT GGCCACCGGC CAGAGCGGCT ACGACGTGGT GGTACCCACC
AACCACTACC TGGCCAAGCA GGTGCGTGCC GGCACCTATC TGAAGCTGGA CAAATCCAAG
CTGCCGAACC TGGTCAATCT CGACCCGACC ATCATGCAGA ACCTGGCCGC GGGCGACCCC
GGCAACGAAT ACTCGGTGCC TTATCTGTGG GGCACCAACG GCATTGGCCT GAACGCCACC
AAGGCCCGTG CCGTGCTCGG CGAAGATGCC CCGCTGGATT CCTGGGCCCT GCTGTTCGAG
CCGCAGTACG CCGAGAAGCT GGCGAAATGC GGCATCGCCC TGCTCGACTC GGGCGACGAA
GTGCTGCCGC AGACGGTCAA CTACCTGGGC CTGTCGCCGC ACACCACCAA GCGCGAAGAC
TACGACAAAG CCTTCGAGCA GATGATGAAG GTGCGCCCGT ACATCACCTA CTTCCACAGC
TCCAAGTTCA TCTCCGATCT GGCCAATGGC GAGATCTGCG CCGCCTTCGG CTACTCCGGC
GATGTGCTGC AGGCCGCCGA CCGTGCCGAA GAGGCCGGCC GCAGCGACGA GATCATCTAC
ATCATTCCCA AGGAAGGCAC CGCGATGTGG GCCGACCTGC TGGCGATTCC CAAGGACGCG
AAGAACGTCG ATGAGGCGCA TGCCTTCATC AACTACCTGC TGCGCCCGGA CGTGATCGCC
AAGATCAGCA ATTACGTGGC CTACGCCAAC CCCAACCTCA AGGCCACCGA GCTGGTCGAC
GAAGGCGTGC GCGAGAATCC GGGCGTGTAT CCCAGCGCGG AGGTCATGGC CAAGCTCTAC
GTTGCCGAGG AACGTACCCC CGAGGTGCAG CGCTGGCTGA CCCGTGACTG GACGCGAATC
AAGAGCGGAC GCTGA
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| Protein sequence | MRRSILLAGL VAAAIGMSAA QAANRVVKVY NWSDYIAPDT IAEFEKETGI KVVYDVFDSN
ETLDGKLATG QSGYDVVVPT NHYLAKQVRA GTYLKLDKSK LPNLVNLDPT IMQNLAAGDP
GNEYSVPYLW GTNGIGLNAT KARAVLGEDA PLDSWALLFE PQYAEKLAKC GIALLDSGDE
VLPQTVNYLG LSPHTTKRED YDKAFEQMMK VRPYITYFHS SKFISDLANG EICAAFGYSG
DVLQAADRAE EAGRSDEIIY IIPKEGTAMW ADLLAIPKDA KNVDEAHAFI NYLLRPDVIA
KISNYVAYAN PNLKATELVD EGVRENPGVY PSAEVMAKLY VAEERTPEVQ RWLTRDWTRI
KSGR
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