| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0342 |
|---|
| Symbol | |
|---|
| ID | 5110311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 349220 |
|---|
| End bp | 350578 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501558 |
|---|
| Product | L-glutamine synthetase |
|---|
| Protein accession | YP_001185847 |
|---|
| Protein GI | 146305382 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.805859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA AGCTTGACCA GCTCACCAGC TGGCTGAAAG AACGCAAAAT CACCGAAGTC
GAATGCCTGA TCAGTGACCT GACCGGCATT GCCCGCGGCA AGATATCGCC GACCAACAAG
TTCCTCGACG AGAAGGGCAT GCGCCTGCCC GAGAGCGTGC TGCTGCAGAC CGTGACCGGC
GACTACGTCG AGGACGACAT CTATTACGAG CTGCTCGACG AGGCGGACAT CGACATGTTC
TGCCGCCCCG ACGAGAACGC CGTGTTCCTC GTGCCCTGGG CCATCGAGCC CACCGCCATG
GTGATCCACG ACACCTTCGA CAAGCAGGGC AACCCCATTG AGCTGTCGCC GCGCAACATT
CTCAAGACCG TGCTGAAGCT GTATGCCGAC AAGGGCTGGC GGCCGATCGT CGCGCCGGAG
ATGGAGTTCT ACCTGACCAA GCGCAACAGC GACCCGGACT TCCCGCTGGT GGCGCCGATG
GGCCGTTCCG GTCGTCCGGA GGTAGGGCGT CAGTCCTTCT CCATCGACGC GGCCAACGAA
TTCGACCCGC TGTTCGAGGA CGTCTACGAC TGGTGCGAGC TGCAGGGCCT GGACCTGGAC
ACGCTGATCC ACGAGGACGG CCCGGCGCAG ATGGAGATCA ACTTCCGTCA CGGCGACGCG
CTGCACCTGG CCGACCAGAT CACCGTGTTC AAGCGCACCA TGCGCGAGGC CGCGCTCAAG
CACGACGTGG CGGCCACCTT CATGGCCAAG CCGATCACCG ACGAGCCGGG CAGCGCCATG
CACATCCACC AGAGCGTGGT GGACATCAAG ACCGGCAAGA ACATCTTCTC CAATGAAGAC
GGCACCATGA GCGAGCTGTT CCTGCAGCAC ATCGGCGGCC TGCAGAAGTA CATCCCCGAG
CTGCTGCCGC TGTTTGCGCC CAACGTCAAC TCGTTCCGCC GCTTCCTGCC CGATACCTCG
GCGCCGGTGA ACGTGGAATG GGGCGAGGAG AACCGTACCG TGGGCTTGCG CGTACCCGAG
GCCGGGCCGC AGAACCGTCG GGTGGAAAAC CGCCTGGCCG GCGCCGACGC CAACCCCTAT
CTGGTGCTGG CCGCGTCGCT GCTGTGCGGC TACATCGGCA TGGTCGAGGG CATCAAGCCC
AGCGCCCCGG TCAAGGGCCG TGGCTACGAG CGCCGCAACC TGCGCCTGCC GCTGACCATC
GAGGCGGCGC TGGAGCGCAT GGAGGCCTGC AAGGCCGCCG AGAAGTACCT GGGCGAGAAG
TTCATGCGCG GCTACGTCGC GGTCAAGCGC GCCGAGCACG AGAACTTCAA GCGCGTGATC
AGCTCCTGGG AGCGTGAGTT CCTGCTGTTG TCGGTGTAA
|
|---|
| Protein sequence | MSTKLDQLTS WLKERKITEV ECLISDLTGI ARGKISPTNK FLDEKGMRLP ESVLLQTVTG
DYVEDDIYYE LLDEADIDMF CRPDENAVFL VPWAIEPTAM VIHDTFDKQG NPIELSPRNI
LKTVLKLYAD KGWRPIVAPE MEFYLTKRNS DPDFPLVAPM GRSGRPEVGR QSFSIDAANE
FDPLFEDVYD WCELQGLDLD TLIHEDGPAQ MEINFRHGDA LHLADQITVF KRTMREAALK
HDVAATFMAK PITDEPGSAM HIHQSVVDIK TGKNIFSNED GTMSELFLQH IGGLQKYIPE
LLPLFAPNVN SFRRFLPDTS APVNVEWGEE NRTVGLRVPE AGPQNRRVEN RLAGADANPY
LVLAASLLCG YIGMVEGIKP SAPVKGRGYE RRNLRLPLTI EAALERMEAC KAAEKYLGEK
FMRGYVAVKR AEHENFKRVI SSWEREFLLL SV
|
|---|
| |