| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0331 |
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| Symbol | gcvT |
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| ID | 5110300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 339634 |
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| End bp | 340731 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501547 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001185836 |
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| Protein GI | 146305371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GTACCCCCCT TTATGACCTG CACCTGGCAC TGGGGGCCAA AATGGTGGAT
TTCGGCGGCT GGGACATGCC GCTGCACTAC GGATCGCAGG TGGAGGAACA CCATCAGGTG
CGTCGCGAGT GCGGCGTGTT CGACGTCTCC CACATGTGCG TGGTGGACGT GACCGGCAGC
CAGGCCCAGG CCTTTCTGCA GCGCCTGCTG GCCAACGACG TGGCGCGCCT GGACAGCGCC
GGCAAGGCCC TGTACAGCGC CATGCTCAAC GAGCAGGGCG GGGTGATCGA TGACCTGATC
GTCTACCTCA CCGGCTCTTC TGCCCAGGAG CAGAGTTACC GTCTGGTGGT CAATGCCGGT
ACCCGCGACA AGGACCTGGC GTGGATGCAT GCCCAGGCCG GCGACTTCGA CGTGCAACTG
CGCGAGCGCC GCGACCTGGC CATGCTCGCC ATCCAGGGAC CCAAGGCCCG CGCGCGCGTG
GCCGAACTGC TGACCCAGGC ACGCGCTGCG CTGATCCACG AGCTGCGGCC GTTCCAGGGG
CTGGCCGAAG GCGACTGGTT CATCGCGCGC ACCGGCTACA CCGGTGAGGA TGGTCTGGAA
ATCGTGCTGC CGGTGGCCGA GGTGGTGCCG CTGCTCAACG AGCTGGTCGG CGCCGGTATC
GCGCCCATCG GCCTCGGTGC GCGCGACACC CTGCGCCTGG AGGCCGGCAT GAACCTCTAC
GGCCAGGACA TGGACGAAAG CGTTTCGCCG CTGGCGGCCA ACATGGCCTG GACCATCGCC
TGGGAGCCGG CCGCGCGCGC CTTCATCGGC CGTGCCGCAC TCGAGGCGCA GCGCGCGGCG
GGTTGCCCGA GCAAGCTGGT CGGCCTGGTG CTGGAAGAGC GCGGCGTGCT GCGCGCGCAT
CAGGTGGTGC GTGTCGAGGG CATCGGCGAA GGTGAAATCA CCAGCGGCAG CTTCTCGCCG
ACGCTGAACA AATCCATTGC CCTGGCTCGC GTGCCGACGG CCACCGGCGA GCGCGCCGAG
GTGGAGATTC GCGGCAAGTG GTACCCGGTG CGAGTGGTCA GGCCGAGCTT CGTGCGCAAC
GGCAAAACCC TTATCTGA
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| Protein sequence | MGQRTPLYDL HLALGAKMVD FGGWDMPLHY GSQVEEHHQV RRECGVFDVS HMCVVDVTGS
QAQAFLQRLL ANDVARLDSA GKALYSAMLN EQGGVIDDLI VYLTGSSAQE QSYRLVVNAG
TRDKDLAWMH AQAGDFDVQL RERRDLAMLA IQGPKARARV AELLTQARAA LIHELRPFQG
LAEGDWFIAR TGYTGEDGLE IVLPVAEVVP LLNELVGAGI APIGLGARDT LRLEAGMNLY
GQDMDESVSP LAANMAWTIA WEPAARAFIG RAALEAQRAA GCPSKLVGLV LEERGVLRAH
QVVRVEGIGE GEITSGSFSP TLNKSIALAR VPTATGERAE VEIRGKWYPV RVVRPSFVRN
GKTLI
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