| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0310 |
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| Symbol | |
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| ID | 5110280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 317715 |
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| End bp | 319181 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501527 |
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| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
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| Protein accession | YP_001185816 |
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| Protein GI | 146305351 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTATC GCGATCTGCG CGACTTCATC CGCGAACTGG AAAAGCGCGG CGAACTCAAG
CGCATTCAGA CCCCGGTTTC GCCCATTCTG GAAATGACCG AAATCTGCGA CCGCACCCTG
CGCAAGGGCG GGCCGGCGCT GCTGTTCGAA AAGCCCACCG GCTTCGACGT GCCGGTGCTC
GGCAACCTGT TCGGCACACC CAAGCGCGTG GCCCTCGGCA TGGGCGCCGA GGACGTTGCC
GAGCTGCGCG AGATCGGCAA GCTGCTGGCC TTCCTCAAGG AGCCGGAGCC GCCCAAGGGG
CTCAAGGACG CCTGGAGCAA GCTGCCGATC TTCAAGAAGG TCATTTCCAT GGCGCCCAAG
GTGGTCAAGG ACGCGCCCTG CCACGAGGTG ATCGAGGAAG GTGAGGACGT CGACCTGAAC
CGGCTGCCGA TCCAGCACTG CTGGCCGGGC GACGTGGCGC CGCTGATCAC CTGGGGGCTG
ACCATCACCA AGGGGCCGAA CAAGGAACGG CAGAACCTCG GCATCTACCG CCAGCAGGTG
ATCGGCCGCA ACAAGGTGAT CATGCGCTGG CTCAGCCACC GTGGCGGCGC GCTGGATTAC
CGCGAGTGGT GCCAGAAATA CCCGGACAAG CCCTACCCGG TGTGCGTCGC GCTTGGCGCC
GACCCGGCCA CCATCCTCGG CGCCGTGACA CCGGTGCCCG ACACCCTCTC CGAATACGCC
TTCGCCGGCC TGCTGCGCGG CCATCGCACC GAGCTGATCA AGGCCGTCGG CAGCGACCTG
CAGGTGCCGG CCAGCGCCGA GATCGTGCTC GAGGGCGTGA TCCATCCGGG CGAGACCGCG
CCGGAAGGCC CCTACGGCGA TCACACCGGC TACTACAACG AGGTGGACAC CTTCCCGGTG
TTCACCGTCG AGCGCATCAC CCGCCGCCGC GAGCCGATCT ACCACAGCAC CTACACCGGT
CGGCCGCCGG ACGAACCGGC AATCCTCGGC GTGGCGCTGA ACGAGGTGTT CGTGCCTATC
CTGCAGAAGC AGTTCCCCGA GATCACCGAC TTCTATCTGC CGCCGGAAGG CTGCTCCTAC
CGCATGGCGG TGGTGACCAT GAAGAAGCAG TACCCGGGCC ACGCCAAGCG CGTAATGCTG
GGTGTGTGGT CGTTCCTGCG ACAGTTCATG TACACCAAGT TCGTTATCGT CACCGACGAC
GATATCAACG CACGGGACTG GAATGACGTG ATCTGGGCGA TTACCACGCG CATGGACCCC
AAACGCGACA CGGTGATGAT CGACAACACG CCGATCGACT ACCTCGACTT CGCCTCGCCG
ATCTCGGGCC TGGGCTCGAA GATGGGTCTG GACGCCACCC ACAAGTGGCC GGGCGAGACC
AGTCGCGAAT GGGGCCGCGC CATCGAGAAG GATCCGGCCG TGGTGGCGCG GGTCGATGCA
CTCTGGGGCG AGCTGGGAAT CGATTGA
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| Protein sequence | MQYRDLRDFI RELEKRGELK RIQTPVSPIL EMTEICDRTL RKGGPALLFE KPTGFDVPVL
GNLFGTPKRV ALGMGAEDVA ELREIGKLLA FLKEPEPPKG LKDAWSKLPI FKKVISMAPK
VVKDAPCHEV IEEGEDVDLN RLPIQHCWPG DVAPLITWGL TITKGPNKER QNLGIYRQQV
IGRNKVIMRW LSHRGGALDY REWCQKYPDK PYPVCVALGA DPATILGAVT PVPDTLSEYA
FAGLLRGHRT ELIKAVGSDL QVPASAEIVL EGVIHPGETA PEGPYGDHTG YYNEVDTFPV
FTVERITRRR EPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEITD FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DINARDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP ISGLGSKMGL DATHKWPGET SREWGRAIEK DPAVVARVDA
LWGELGID
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