| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0306 |
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| Symbol | |
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| ID | 5110276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 313760 |
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| End bp | 314545 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501523 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185812 |
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| Protein GI | 146305347 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.654569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAT TTCACCGCAC CCTGCTGGGT ACCCTGTTCG CCGCACTGGC CTTCGGCGCT
GCCGCTGCGC ACGCCGACGC GCTCGAAGAC ATCAGCGCCG CCGGCGTGCT GAAGGTCGCC
GTACCGCAGG ACTTTCCACC GTTCGGCTCG GTCGGCCCGG ACATGAAACC GCGCGGCCTG
GATATCGACA CCGCGCAGCT GCTGGCGGAC AAGCTGCAAG TCAAGCTGGA ACTGACCCCG
GTCAACAGCA CCAACCGCAT CCCCTTCCTC ACCACCGGCA AGGTGGATCT GGTGATTTCC
AGCCTGGGCA AGAATCCCGA GCGTGAAGCG GTGATCGACT TTTCGGCGCC CTATGCGCCC
TTCTATCTCG GCGTGTTCGG CCCGGAAGAC GCCGCCATCG CCAGCCTCGA CGACCTGGCC
GGCAAGACCA TCAGCGTCAC CCGTGGCTCC ATCGAGGACA TCGAGCTGAG CAACGTCGCC
CCGAAGGGCG CCACCATCAA GCGCTTCGAG GACAACAACT CGACCATCGC CGCCTACCTG
TCCGGCCAGG TCGAGCTGAT CGCCAGCGGC AACGTGGTGA TGGTGGCCAT CGCCGAGCGC
AACCCCAAGC GCATTCCGAG CATGAAGCTC AAACTCAAGG ACTCGCCGGT GTACGTCGGC
GTGAACAAGA GCCAGACCGC GCTGCTGGAC AAGGTCAACG CCATCATCGC CGACGCCAAG
GCCGACGGCA GCCTCGAGGC GCTCAGCCAG AAGTGGCTGA AGCAACCGCT GCCGGCCGAC
CTCTGA
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| Protein sequence | MGKFHRTLLG TLFAALAFGA AAAHADALED ISAAGVLKVA VPQDFPPFGS VGPDMKPRGL
DIDTAQLLAD KLQVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPEREA VIDFSAPYAP
FYLGVFGPED AAIASLDDLA GKTISVTRGS IEDIELSNVA PKGATIKRFE DNNSTIAAYL
SGQVELIASG NVVMVAIAER NPKRIPSMKL KLKDSPVYVG VNKSQTALLD KVNAIIADAK
ADGSLEALSQ KWLKQPLPAD L
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