| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0291 |
|---|
| Symbol | |
|---|
| ID | 5110261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 298916 |
|---|
| End bp | 299590 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640501508 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001185797 |
|---|
| Protein GI | 146305332 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCGT TCTCCCGATT TCTGCTCCCC GAGGTACGCA TCATGGCATT GGAAACCTGG
CTCGCTTTCT TCGTCGCCTG CTGGGTGATC AGCCTGTCGC CCGGTGCCGG CGCCGTGGCG
TCGATGTCCG CTGGCCTGCA ATACGGCTTC TGGCGCGGTT ACTGGAACGC CCTCGGCCTG
CAGCTCGGCC TGGCCCTGCA GATCGCCATC GTCGCGGCGG GCGTGGGCGC CATCCTCGCC
GCCTCGGCGC TGGCTTTCAG CCTGATCAAA TGGTTCGGCG TCGCCTATCT GGTGTTTCTC
GCCTACAAGC AGTGGGTCGC TCTGCCCAGC GATCTGGATG CCGGTGCCAC CGAGCGCCCC
AGCGGGCGGC CGCTGACCCT GGTGCTGCGC GGCTTTCTGG TCAATGCCAG CAACCCCAAG
GCCATCGTCT TCATGCTTGC CGTGCTGCCG CAGTTCATCA ATCCGCATGC GCCTTTGCTG
GCGCAGTATC TTGTGATGGG CCTGACCATG ATCGTGGTCG ACCTGATCGT CATGGCCGGC
TACACCGGCC TGGCTTCGCG GGTGCTGCGC GCACTGCGCA CGCCGCGGCA GCAGCGGGTG
ATGAACCGCA GTTTCGCCGC GCTGTTCGCC GCCGCTGCCG GTCTGCTGGC CACGGTCAAA
CGCGCCGCGG TCTGA
|
|---|
| Protein sequence | MEPFSRFLLP EVRIMALETW LAFFVACWVI SLSPGAGAVA SMSAGLQYGF WRGYWNALGL
QLGLALQIAI VAAGVGAILA ASALAFSLIK WFGVAYLVFL AYKQWVALPS DLDAGATERP
SGRPLTLVLR GFLVNASNPK AIVFMLAVLP QFINPHAPLL AQYLVMGLTM IVVDLIVMAG
YTGLASRVLR ALRTPRQQRV MNRSFAALFA AAAGLLATVK RAAV
|
|---|
| |