Gene Pmen_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0288 
Symbol 
ID5110258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp295950 
End bp296393 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID640501505 
Producthypothetical protein 
Protein accessionYP_001185794 
Protein GI146305329 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGATC TGTGGAATTT CGCCCTCGAA CTCTATGCCA GACCGGGCGT GGAACAGGCA 
TGCCTGGATT TGCAGGACGC CGGTAGCGAC GTCTGCCTGC TGCTGACCGG CGCCTGGCTG
CAGCAACGTG GCGTGCGCTG CGTGGATGAG CGCCTGCGCG CACTGACGGA GGTGGCGGGC
CCCTGGCAAC GTGAAGTGGT CTCGCCCTTG CGGCAGACGC GGCGCCACTG GCGCACGGCC
GCAGGCCAGG ACGACGAATT GGCCGCCCTG CGCGAACAGA TCAAGAAGCT GGAACTGCAG
GCCGAGCGGG TGCTGCTCGA GCGGCTGCAG GCGCTGGCCG CGAACTGGCC AGACGAAGAG
GCGCAAAGCG ACTGGCTGCT TGCCCTGACC GGCGAGAACA GCGCCGCGCT GCAGGTGCTG
CGCGGCGCCA TTCGCCTCGC TTAG
 
Protein sequence
MQDLWNFALE LYARPGVEQA CLDLQDAGSD VCLLLTGAWL QQRGVRCVDE RLRALTEVAG 
PWQREVVSPL RQTRRHWRTA AGQDDELAAL REQIKKLELQ AERVLLERLQ ALAANWPDEE
AQSDWLLALT GENSAALQVL RGAIRLA