| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0282 |
|---|
| Symbol | |
|---|
| ID | 5110252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 290357 |
|---|
| End bp | 291487 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640501499 |
|---|
| Product | protein of unknown function DUF513, hemX |
|---|
| Protein accession | YP_001185788 |
|---|
| Protein GI | 146305323 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAG CAGCCACCCC GCAAACGCCA GAAGAAAAAC CGGCCAGCGA GGCCGTGAAC
ACCACCCCGA CCCCGCCCGT GAAGCCAGCG CGCATTGGCG CCGCGACCGG GCTTGCCGCG
TTCGCTCTGC TGATCGGCCT GGCCGGCGCT GGCGCCGGCG GCTGGAGCCT CTGGCAATTG
CAGCAGATGC AGAGCAGGGA TCAGCAGCAG GCCGAGGCCC TGCAGCGCAC GCGCGACGAC
AGCGCGAAAC AGCTTCAGGG ACTGGCCCGG CAGCTCGATG CGCGGCTCGC CGAGCTGCCC
AGTGCCTCCG AACTGAACGA ACGGCGCCGC CTGCTGGCCA ACCTGCAGTC CGATCAGCAG
CGCCTCAGCC AGCGCCTGGA GTCGGTACTC GATGGCAGCC GCCAGGACTG GCGCCTGGAC
GAGGCCGAGC ACCTGTTGCG CCTGGCCAGC CTGCGTCTGT CTGCCCTGCA GGACGTCGCC
GGCGCCGAGG CCCTGGTGCT GACGGCCGAT GACATCCTGC GCGAGCAGGA CGATCCCGCC
GCATTCGCCG CCCGTGAGCA GCTCAGCCGC AGCCTGGAAG CGCTGCGCAC CACGCAGCGC
CCGGACCGCG TCGGTCTGTT CCTGCAACTG GGCGCGCTGC GCGAGCAGGC CGCCACGCTC
AATCCGCTGG CGCCGACCTT CGAAGGCCAG GGCGACGTGC TCTCCGACCT GGCTGCCGAG
GGCGATGGCA GCGCCTGGTG GGGCGAATGG GTTAAGAAAC TGTCGGAATA CTTCCGCATC
GAGTTCGACG CTGACCGCAA CGTGCGGCCG CTGCTGTCCG GGCAAAGCCT GTCGCAGGTT
CGCCTGAGCC TGTCGCTGGC GCTGGAGCAG GCGCAGTGGG CCGCCCTGCA CGGCCAGACC
GGCGTGTACC GGCAGGCGTT GAAGCAGGCG GAGGAGATCC TCGATGCCCA CTTCAACCTG
GACAACCCGG ACAGCCGTGC CCTGCGCCAG CGCTTCGCCG AACTGGCGGA CGCCACCGTC
GAGGTCAAGG TGCCGGATCT GAGCGATTCG CTCGACGCGC TGCAGGCCTA CCTGCACCGC
AAGCAGGCGC AGCGCCGGCA GGGGGCCGCC GCGGCCGAGG AGGCGCAATG A
|
|---|
| Protein sequence | MSEAATPQTP EEKPASEAVN TTPTPPVKPA RIGAATGLAA FALLIGLAGA GAGGWSLWQL
QQMQSRDQQQ AEALQRTRDD SAKQLQGLAR QLDARLAELP SASELNERRR LLANLQSDQQ
RLSQRLESVL DGSRQDWRLD EAEHLLRLAS LRLSALQDVA GAEALVLTAD DILREQDDPA
AFAAREQLSR SLEALRTTQR PDRVGLFLQL GALREQAATL NPLAPTFEGQ GDVLSDLAAE
GDGSAWWGEW VKKLSEYFRI EFDADRNVRP LLSGQSLSQV RLSLSLALEQ AQWAALHGQT
GVYRQALKQA EEILDAHFNL DNPDSRALRQ RFAELADATV EVKVPDLSDS LDALQAYLHR
KQAQRRQGAA AAEEAQ
|
|---|
| |