| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0280 |
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| Symbol | hemC |
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| ID | 5110250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 288636 |
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| End bp | 289574 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501497 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001185786 |
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| Protein GI | 146305321 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG AAATCCGCAT CGCCACCCGT AAGAGCGCCC TGGCCCTGTG GCAGGCCGAA
TATGTCAAAG CCCGCCTCGA ACAGGCCCAC CCCGGTCTGC TGGTGAGTCT GGTGCCCATG
GTCAGCCGCG GCGACAAGCT GCTCGATGCG CCGCTGGCGA AGATCGGCGG CAAGGGCCTG
TTCGTCAAGG AACTGGAAAC CGCGCTGCTG GAGAACGAGG CCGACATCGC CGTGCATTCG
ATGAAGGACG TGCCGATGGA CTTCCCCGAA GGCCTGGGCC TGTACTGCAT CTGCGAGCGC
GAGGACCCGC GCGACGCCTT CGTTTCCAAC ACCTATGACA GCCTCGACGC CTTGCCGGCC
GGCAGCGTGG TGGGCACCTC CAGCCTGCGT CGCCAGGCCC AGCTGCTGGC CCGCCGGCCC
GATCTGAAAA TCCAGTTCCT GCGCGGCAAC GTCAACACCC GCCTGGCCAA GCTCGATGCC
GGCGAGTACG ACGCCATCAT CCTTGCCGCC GCCGGCCTGA TCCGCCTCGG CTTCCAGGAC
CGTATCCGCA GCTCGATCAG CGCCGAGGAC AGCCTGCCGG CCGGTGGCCA GGGTGCCGTC
GGCATCGAGT GCCGAAGCGC CGACGCCGAG ATCCATGCGC TGCTGGCGCC GCTGCATCAC
CGCGAAACCG CGCTGCGGGT GACCGCCGAG CGCGCATTGA ACAAGCGCCT CAATGGCGGC
TGCCAGGTGC CCATCGCCTG CTACGCGCTG CTGGAGAACG ACCAACTGTG GCTGCGCGGC
CTGGTCGGCC AGCCTGACGG CGGCCTGTTG CTGCGCGCAG AACACCGCGC CGCCAGCAGC
GACGCCGAAG CCCTGGGGGT GCGGGTGGCC GAGGCGCTGC TGGCGCAGGG CGCCGAGGCC
ATCCTCAAGG CCGTTTATGG CGAGGCCGGC CACCCGTGA
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| Protein sequence | MPREIRIATR KSALALWQAE YVKARLEQAH PGLLVSLVPM VSRGDKLLDA PLAKIGGKGL
FVKELETALL ENEADIAVHS MKDVPMDFPE GLGLYCICER EDPRDAFVSN TYDSLDALPA
GSVVGTSSLR RQAQLLARRP DLKIQFLRGN VNTRLAKLDA GEYDAIILAA AGLIRLGFQD
RIRSSISAED SLPAGGQGAV GIECRSADAE IHALLAPLHH RETALRVTAE RALNKRLNGG
CQVPIACYAL LENDQLWLRG LVGQPDGGLL LRAEHRAASS DAEALGVRVA EALLAQGAEA
ILKAVYGEAG HP
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