Gene Pmen_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0272 
Symbol 
ID5110242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp280155 
End bp280955 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID640501489 
Productlipase, class 3 
Protein accessionYP_001185778 
Protein GI146305313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTC TGCCCCTGTA TTTCCCGCCC ACCTATCAGC TAGCGCGCGC CCAGCGCTGT 
GCCGAGCTGG TGATACTCGC GTACGATCAG TACGCGCAGT GGCTGGCGCA GCAGCGCCCG
CGCAAGCCCC AGCAGTTTCA CTGGCAGCCG CCTCAGCAGG CCGGCTGGCA GCTGTCCGCA
CCGATCTGGA GCATCCTCAG CGAGTGGTAC GTGCTCGACG AGTCGGAGCC GTTCGGCTTT
GCCGCGCGCG ATGCGCAGGG CGACTGCTAT CTGGTGTTCC GCGGTACCGA GTCGGTGCAG
GACTGGCTCG ATGACCTCGA TCTGGATCAG CGCGCCTACC CCTGGCAGGC CGGCGGCGGC
CTGGTGCACG ACGGTTTCCT CAAGCTGTAT GCGTCCCTGC GCGACCAGGC GTTGCTGGCG
CTGGAACAGC TGCAGCCACA GGGCATGCTC TGGGTCTGCG GCCACAGCCT GGGCTGTGCG
CTGAGCAGCC TGGCGGTACC GGATCTGCGG CGGCGCTGGC CCTTTCTGGC GCTGCAGCAC
TACAACTTCG CCAGCCCGCG GCTGGCCTCG CCGGCGTTCG CCAACTACTA CAACGCGCTG
GCCGTGCCCA CCTATCGGCT GGTCAACGAC AGCGACCTGG TGCCGGAGCT GCCGCCGGCG
GACAGCGATG GCTGGCTCTA CCAGCATCTC GGCCTGGCGG TGACCTTCAC CGCCAGTTAC
GCAGGGGTTG CCGACAATCA CAGCATGGGC GGCTGTTATC TCTTCGCGCT GAACAATCCG
CAGTCGCCAA TGCGCGGCTA G
 
Protein sequence
MSSLPLYFPP TYQLARAQRC AELVILAYDQ YAQWLAQQRP RKPQQFHWQP PQQAGWQLSA 
PIWSILSEWY VLDESEPFGF AARDAQGDCY LVFRGTESVQ DWLDDLDLDQ RAYPWQAGGG
LVHDGFLKLY ASLRDQALLA LEQLQPQGML WVCGHSLGCA LSSLAVPDLR RRWPFLALQH
YNFASPRLAS PAFANYYNAL AVPTYRLVND SDLVPELPPA DSDGWLYQHL GLAVTFTASY
AGVADNHSMG GCYLFALNNP QSPMRG