Gene Pmen_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0269 
SymbolcyaY 
ID5106236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp279052 
End bp279384 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID640501486 
Productfrataxin-like protein 
Protein accessionYP_001185775 
Protein GI146305310 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1965] Protein implicated in iron transport, frataxin homolog 
TIGRFAM ID[TIGR03421] iron donor protein CyaY 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA GCGAAGCCCG CTTCCACGAT CTGGTCGATG CCACCCAGCA GGCGGTGGAG 
GACATCTTTG ACGACAGCGG TCTGGACGTC GATCTGGAGA ACAGCGCCGG CGTACTCACG
GTGCGCTTCG ACAACGGCAG CCAACTGATC TTCAGCCGCC AGGAGCCGAT CCGTCAGCTG
TGGCTGGCGG CGCGCTCGGG GGGCTACCAC TTCGATTACG ACGAGGCCGA AGGGCGCTGG
ATCTGCGACA GCAGCGACGA GCAGCTGGGC GAGATGCTGG TGCGCATCAC GCTGGAACAG
TCCGGTGCCG AGCTGGAGTT CGATGAGCTC TGA
 
Protein sequence
MSLSEARFHD LVDATQQAVE DIFDDSGLDV DLENSAGVLT VRFDNGSQLI FSRQEPIRQL 
WLAARSGGYH FDYDEAEGRW ICDSSDEQLG EMLVRITLEQ SGAELEFDEL