Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0269 |
Symbol | cyaY |
ID | 5106236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 279052 |
End bp | 279384 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501486 |
Product | frataxin-like protein |
Protein accession | YP_001185775 |
Protein GI | 146305310 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1965] Protein implicated in iron transport, frataxin homolog |
TIGRFAM ID | [TIGR03421] iron donor protein CyaY |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGA GCGAAGCCCG CTTCCACGAT CTGGTCGATG CCACCCAGCA GGCGGTGGAG GACATCTTTG ACGACAGCGG TCTGGACGTC GATCTGGAGA ACAGCGCCGG CGTACTCACG GTGCGCTTCG ACAACGGCAG CCAACTGATC TTCAGCCGCC AGGAGCCGAT CCGTCAGCTG TGGCTGGCGG CGCGCTCGGG GGGCTACCAC TTCGATTACG ACGAGGCCGA AGGGCGCTGG ATCTGCGACA GCAGCGACGA GCAGCTGGGC GAGATGCTGG TGCGCATCAC GCTGGAACAG TCCGGTGCCG AGCTGGAGTT CGATGAGCTC TGA
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Protein sequence | MSLSEARFHD LVDATQQAVE DIFDDSGLDV DLENSAGVLT VRFDNGSQLI FSRQEPIRQL WLAARSGGYH FDYDEAEGRW ICDSSDEQLG EMLVRITLEQ SGAELEFDEL
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