| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0263 |
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| Symbol | |
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| ID | 5106230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 273185 |
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| End bp | 273886 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501480 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001185769 |
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| Protein GI | 146305304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG AACTGATCAC CTTCGACCTC GACGACACCC TGTGGGACGT CACGCCGGTG
ATGCAGGACG CCGAGGCGGC CCTGCGCAAC TGGCTGGCCC TGCATGCGCC GCGCCTGGGC
GCGGTGCCGG TCGAGCATCT GTGGACGGTA CGCAGCCGCC TGCTCAACGC GGAGCCCATG
CTCAAGCACC GCCTGAGCGA GCTGCGCCGG CGCATTCTGT TTCACGCCCT GGAAGAGGCG
GGTTATCCGC ACGGCGAGGC GCAGGCACTG GCCGAAGCCG GCTTTCAGGT GTTTCTCAAC
GCCCGCCATC AGGTCGAGCT ATTCGCCGAA GTGCACCCGA CGCTGGAAGC CCTGGCCGAG
CGCTTCATGC TCGGGGTGAT CACCAATGGC AATGCCGATG TGCGCCGTCT GGGGCTGTCG
GAGTATTTCC GCTTCGCCCT GTGCGCCGAA GAGCTGGGCA TCGGCAAACC CGATCCGAAG
CCCTTCCGCG AAGCCCTCAG CCGCGCAGGC GGCGTGGCCG CCGAACGCGC CGTGCATATC
GGCGATCACC CCAGTGACGA TATCGCCGGT GCCCAGGCGG CCGGCATGCG GGCGATCTGG
TTCAACCCGC AAGGGCGCAG CTGGGAAGGC GAAACCACGC CGGATGCGCA GATCGCCAGC
CTGGCCGAGC TGCCGGCGCT GCTGGGCAGC TGGACACGCT GA
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| Protein sequence | MSIELITFDL DDTLWDVTPV MQDAEAALRN WLALHAPRLG AVPVEHLWTV RSRLLNAEPM
LKHRLSELRR RILFHALEEA GYPHGEAQAL AEAGFQVFLN ARHQVELFAE VHPTLEALAE
RFMLGVITNG NADVRRLGLS EYFRFALCAE ELGIGKPDPK PFREALSRAG GVAAERAVHI
GDHPSDDIAG AQAAGMRAIW FNPQGRSWEG ETTPDAQIAS LAELPALLGS WTR
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