Gene Pmen_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0259 
Symbol 
ID5106226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp270217 
End bp270555 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content61% 
IMG OID640501476 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001185765 
Protein GI146305300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG TCACTGCCAT CATCAAGCCG TTCAAGCTGG ACGACGTGCG CGAGTCGCTG 
TCGGAGATCG GCGTGCAGGG CATTACCGTC ACCGAGGTCA AGGGCTTCGG CCGCCAGAAA
GGCCACACCG AGCTGTATCG CGGCGCCGAG TACGTGGTCG ACTTCCTGCC CAAGGTGAAG
ATCGACGTGG CCATCGCTGA CGACCAGCTG GATCGCGTGA TCGAGGCCAT CACCAAGGCG
GCCAACACCG GCAAGATCGG TGACGGCAAG ATCTTCGTGG TCAACCTGGA ACAGGCGATT
CGCATCCGTA CCGGCGAAAC CGATACCGAC GCGATCTAA
 
Protein sequence
MKLVTAIIKP FKLDDVRESL SEIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IDVAIADDQL DRVIEAITKA ANTGKIGDGK IFVVNLEQAI RIRTGETDTD AI