Gene Pmen_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0258 
Symbol 
ID5106225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp269546 
End bp269893 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content63% 
IMG OID640501475 
Producthypothetical protein 
Protein accessionYP_001185764 
Protein GI146305299 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAA ATTGTGCAGC TCGCCCCGGA ACGTCTCATG TACAGCTGCG TGCTACACTG 
CCGGCCGTCT GTACTCGGAA CCCGACCATG CTGCCGCCCA AAGCCCTGCT CGACACCCTC
AGTAGCCACG CCTCGCGTCT GTTCAGCGGC GACAGCCCGC TGCCGCGCGC CGAACTGGAG
GCTCAGTTCA AAGCGCTGCT GCAAAGCGGC TTCAGCAAGC TGGAGCTGGT CAGCCGTGAA
GAATTCGACA GCCAGATGGT GGTCCTGGCC CGCACTCGCG CCCGCCTCGA AGCGCTGGAA
GCCAAGGTTG CCGAACTGGA AGCCAAGCTG AACCCACCCA CCGACTGA
 
Protein sequence
MLKNCAARPG TSHVQLRATL PAVCTRNPTM LPPKALLDTL SSHASRLFSG DSPLPRAELE 
AQFKALLQSG FSKLELVSRE EFDSQMVVLA RTRARLEALE AKVAELEAKL NPPTD