Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0255 |
Symbol | |
ID | 5106222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 265479 |
End bp | 266864 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640501472 |
Product | multidrug efflux protein NorA |
Protein accession | YP_001185761 |
Protein GI | 146305296 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATT CTCTTGGTCA TGAGCTGGGC GCGCTGCTGC GCCTGGCCGG CCCGCTGATC TCCGCCCAGC TGGCCCACGC GCTGATGATC TTCACCGATA CGCTGATGAT GGCGATGCTC GGCCCCAAGC AGCTGGCTGG CGGCGCGCTG GGCGCCACCT GCTACTTCAT CTTCTCGATC TTCTGCACCG GGGTGATCGC CGCCGTGGGC AGCCTGGTCG CCATCCGCCA TGGCGCCGGC GATCCGCAAG GGGTCACCCG CCTGCTGCAG AACGGCCTGT GGCTGGCGCT GCTGCTGGGC ATGGTCAGCG CGCTGTGCCT CAATGGCCTG GGCCCGCTGC TGCCGCATCT GGGCCAGGCG CCCGATGCCG CGGGTCTGGC CATGGAGTTC CTGCGCCCGC TGTCGCTGGC CCTGCCCGGC TACCTGTGCT TCATGGCCCT GCGCGGTTTC ACCAGCGCCA TCGGCCATCC CGGCCCGGTG ATGGCCATCA GCATCGCCGG CACGGCGGCC AACTTTGTCA TCAACTATGC ACTGATCAAG GGCTGGTTCG GCCTGCCCAG CCTGGGCCTG GGCGGCATCG GCATGACCAC GGCGCTGGTC AGCACCGGCA TGGCCCTGGC CTTGGCGCTG TACATCCTGC GTGCGCCGCA CTACCGCCTG TACGGCTTGC GCAGCGGCCT GGGCCGCCCG CAGCGCGCGC AGATGCGCTC ATTGCTGCGC CTGGGCCTGC CCATCGGCGG CACCTACGCC GCCGAGCAGG GCCTGTTCAC CTTCGCCACC CTGTGCATGG GCGCTTTGGG CAGCGTACAG CTGGCGGCGC ATCAGATCGC CATGCAGACC GTGGCACTGG CCTTCATCGT GCCGCAGGGG CTGTCCTATG CCGTGACCTT CCGCGTCGGC CTGCACTACG GTGCCGGGCG TCTGCCGCTG TCGCGCCTCA GCGGTCATCT GGGCATGGGC CTGGGTGCGG CGCTGATGCT GCTGTTCGCC CTGCTGTTCT GGCTGCTGCC GGAATGGATC ATCGGTTTGT TTCTCGACCG TCACGATCCG GCCTTTGCCG AGATCGTGAC CCTGGCGGTC AGCCTGCTGG CGATCGCCGC CTGGTTCGAG CTGTTCGATG GCCTGCAGAG CATCGCCATG GGCGCCATTC GCGGGCTGAA CGACGGCCGC ACGACCCTGG TGATCGGCCT GGCCGGCTAC TGGTGCGTGG GCGCGCCGCT GGCCTGGCTG CTGGCCTTCG CCCTCGGCTG GGGCGCACAG GGCGTCTGGT GGGGGCTGGC GGCCGGCCTG GCGGTGACCG CGAGCGGCCT GGTGCTGGGC TTCCAGTGGA AGACGGCACG CCTGCAGCGG CAGGACAGGG TCGACGGCGA AGTTTGCCTG TCCTGA
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Protein sequence | MKNSLGHELG ALLRLAGPLI SAQLAHALMI FTDTLMMAML GPKQLAGGAL GATCYFIFSI FCTGVIAAVG SLVAIRHGAG DPQGVTRLLQ NGLWLALLLG MVSALCLNGL GPLLPHLGQA PDAAGLAMEF LRPLSLALPG YLCFMALRGF TSAIGHPGPV MAISIAGTAA NFVINYALIK GWFGLPSLGL GGIGMTTALV STGMALALAL YILRAPHYRL YGLRSGLGRP QRAQMRSLLR LGLPIGGTYA AEQGLFTFAT LCMGALGSVQ LAAHQIAMQT VALAFIVPQG LSYAVTFRVG LHYGAGRLPL SRLSGHLGMG LGAALMLLFA LLFWLLPEWI IGLFLDRHDP AFAEIVTLAV SLLAIAAWFE LFDGLQSIAM GAIRGLNDGR TTLVIGLAGY WCVGAPLAWL LAFALGWGAQ GVWWGLAAGL AVTASGLVLG FQWKTARLQR QDRVDGEVCL S
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