| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0253 |
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| Symbol | |
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| ID | 5106220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 261491 |
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| End bp | 263500 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501470 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001185759 |
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| Protein GI | 146305294 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAC TGAATCCCCG GCAACAAGAG GCCGTGAACT ACGTCGGCGG CCCACTTCTG
GTGCTCGCCG GTGCAGGCTC CGGCAAGACC AGCGTGATCA CCCGCAAGAT CGCCCACCTG
GTGCAGAACT GCGGCATCCA GGCGCGACAC ATCGTCGCCA TGACCTTCAC CAACAAGGCT
GCGCGCGAGA TGAAGGAGCG CGTCGGCACC CTGCTGCGCG GCAGCGAAGC GCGCGGGCTG
ACCGTGTCCA CCTTCCACAA CCTGGGCATG AACATCATCC GCAAGGAGTA CGCGCGCCTG
GGCTACAAGC CCGGTTTCTC GATCTTCGAC GACGGCGACA TCAAGGCGCT GCTCACCGAC
ATCATGCAGA AGGAATACGC CGGCGACGAC GGGGCCGACG AGGTGAAGAA CCTCATCGAC
AGCTGGAAGA ACGACCTGAT CCTGCCCGAC GAGGCGCTGG CCAAGGCGCG CGGGCCCAAG
GAGCAGACCG CGGCCATCGT CTACCTGCAC TACCAGCGCA CGCTCAAGGC GTACAACGCG
GTGGACTTCA ACGACCTGAT CCTGCTGCCG GTCAAGCTCT TCCAGGAGCA CCCCGACATC
CTCGAGAAGT GGCAGAACCG CATCCGCTAC CTGCTGGTGG ACGAATACCA GGACACCAAC
GCCAGCCAGT ACCTGCTGGT GAAGATGCTG GTGGGCATGC GCAACCAGTT CACCGTGGTC
GGCGACGACG ACCAGTCGAT CTACGCCTGG CGCGGCGCGC GCCCGGAAAA CCTGATGCTG
CTCAAAGAGG ACTATCCGTC GCTGAAGGTG GTGATGCTGG AGCAGAACTA CCGCTCCACC
AGCCGCATCC TCAAGTGCGC CAACATCCTC ATCGCCAACA ACCCCCACGT GTTCGAGAAG
CAGCTGTGGT CGGAGATGGG CCATGGCGAC GAGATTCGCG TGATCCGCAC GCGCAACGAG
GAGGCCGAGT GCGAGCGGGT GGCGCTGGAA ATCCTCACCG AGCACCTGCG CACCCAGCGC
CCCTACAGCG ACTTCGCCAT CCTCTACCGC GGCAACTACC AGGCCAAGCT GATGGAGCTG
AAGCTGCAGC ACCACCAGAT TCCCTATCGT CTCTCCGGCG GCACCAGCTT CTTCGCCCGC
CAGGAGGTGA AGGACCTGAT GAGCTACTTC CGCCTGCTGG TCAACCCGGA CGACGACAAC
GCCTTCCTGC GCGTGATCAA CGTGCCGCGC CGCGAGATCG GCTCGACCAC CCTGGAAAAG
CTCGGCAACT ACGCCAGCGA GCGCAAGATC AGCATGTACG CGGCGGCCGG CGAGATCGGC
CTCGGCGAAC ACCTCGACGC CCGCTTCACC GAGCGCCTGC AGCGCTTCAC CCGCTGGATG
GACCGCGTGC GCCAGGAGTG CGCGCAGAAC GATCCGATCG CCGCCATCCG CAGCATGGTC
ATGGACATCG ACTACGAGAA CTGGCTGCGG CAGAACGCCT CCAGCGACAA GGTGGCCGAC
GCGCGCATGG GCAACGTCTG GTTCCTCGTG GACGCGCTGA AGAACACCCT GGAGCGCGAC
GAAGACGGCG ACATGACCAT CGAGGACGCC ATCGGCAAAC TGGTGCTGCG CGACATGCTC
GAGCGCCAGC AGGAGGAGGA AGAAGGCGCC GAGGGCGTGC AGATGATGAC CATGCACGCC
TCCAAGGGCC TGGAGTTCCC CTCGGTATAC ATCATCGGCT TCGAGGAGGA GATCCTCCCG
CACCGTTCCA GCATCGAGGC CGACACCATC GAGGAAGAGC GGCGCCTGGC CTATGTCGGC
ATCACCCGCG CCAAACGCAA CCTGACCCTG ACCTTCGCCG CCAAGCGCAA GCAGTACGGC
GAGGTGATCG ACTGCTCACC GAGCCGTTTC CTCGACGAGC TGCCGCCGGA GGATCTGGTG
TGGGAAGGCC TGGAAGAGGC GCCGGTGGAG GTCAAGGCGG CGCGCGGCAA CGATGCCCTG
GCCAATATGC GGGCGATGCT CAAGCGCTGA
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| Protein sequence | MSRLNPRQQE AVNYVGGPLL VLAGAGSGKT SVITRKIAHL VQNCGIQARH IVAMTFTNKA
AREMKERVGT LLRGSEARGL TVSTFHNLGM NIIRKEYARL GYKPGFSIFD DGDIKALLTD
IMQKEYAGDD GADEVKNLID SWKNDLILPD EALAKARGPK EQTAAIVYLH YQRTLKAYNA
VDFNDLILLP VKLFQEHPDI LEKWQNRIRY LLVDEYQDTN ASQYLLVKML VGMRNQFTVV
GDDDQSIYAW RGARPENLML LKEDYPSLKV VMLEQNYRST SRILKCANIL IANNPHVFEK
QLWSEMGHGD EIRVIRTRNE EAECERVALE ILTEHLRTQR PYSDFAILYR GNYQAKLMEL
KLQHHQIPYR LSGGTSFFAR QEVKDLMSYF RLLVNPDDDN AFLRVINVPR REIGSTTLEK
LGNYASERKI SMYAAAGEIG LGEHLDARFT ERLQRFTRWM DRVRQECAQN DPIAAIRSMV
MDIDYENWLR QNASSDKVAD ARMGNVWFLV DALKNTLERD EDGDMTIEDA IGKLVLRDML
ERQQEEEEGA EGVQMMTMHA SKGLEFPSVY IIGFEEEILP HRSSIEADTI EEERRLAYVG
ITRAKRNLTL TFAAKRKQYG EVIDCSPSRF LDELPPEDLV WEGLEEAPVE VKAARGNDAL
ANMRAMLKR
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