Gene Pmen_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0251 
Symbol 
ID5106218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp260123 
End bp260695 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID640501468 
Productxanthine phosphoribosyltransferase 
Protein accessionYP_001185757 
Protein GI146305292 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01744] xanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCT TGAAACAGAA GATACTCAGC GAAGGCATCG TCCTTTCCGA TCAGGTGCTG 
AAGGTCGATG CCTTCCTCAA CCACCAGATC GATCCGGCGC TGATGCAGCA GATCGGTCAC
GAATTCGCCC AGCGCTTCGC CGGCCAGGGC ATCACCAAGA TCGTCACCAT CGAGGCCTCC
GGCATCGCCC CGGCGGTGAT GGCCGGCCTC GAGCTGGGCA TCCCGGTGAT CTTCGCGCGC
AAGTTCCAGT CGCTGACGCT CAAGGACGAC CTGCTGATCT CCAAGGTGTT CTCCTTCACC
AAACAGACCG AAAGCACCAT CGCCATTTCC GCCCGTCACC TGACCGCTGC CGACAAGGTG
CTGGTGATCG ACGACTTCCT CGCCAACGGT CACGCCGCCA AGGCGCTGAT CGACCTGATC
CAGCAGGCCG GCGCCCAGGT GGCCGGCATC GGCATCGTCA TCGAGAAATC CTTCCAGGAA
GGCCGCAACC TGCTGGAGAG CGAAGGCTAC CGCGTCGAGT CGCTGGCCCG GGTCGCGGCG
CTGGAAAACG GCCAGGTACG TTTTCTCGAC TGA
 
Protein sequence
MESLKQKILS EGIVLSDQVL KVDAFLNHQI DPALMQQIGH EFAQRFAGQG ITKIVTIEAS 
GIAPAVMAGL ELGIPVIFAR KFQSLTLKDD LLISKVFSFT KQTESTIAIS ARHLTAADKV
LVIDDFLANG HAAKALIDLI QQAGAQVAGI GIVIEKSFQE GRNLLESEGY RVESLARVAA
LENGQVRFLD