Gene Pmen_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0246 
Symbol 
ID5106213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp254747 
End bp255097 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID640501463 
Productendoribonuclease L-PSP 
Protein accessionYP_001185752 
Protein GI146305287 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCC AGCGCCTGCA TGTGGAAAAG CGCTACAGCG AAGTGGTAAT CCACAACGGC 
ACCGTCTACC TCGCCGGCCA GCTCGCCGAC GACTACAGCG GCGACATCCG CCAGCAGACC
CGCGAGACCC TGGCCAATAT CGATCGCATG CTGGCCGAGG CCGGCAGCGA CAAGAGCAAG
ATTCTTTCCG TGACCATCTA CCTCAAGGAC ATGGACGCTC ATTACGACGG CCTCAACGCC
GAGTACGACG CCTGGGTCGC CGAGGGTGCC GCGCCGGCAC GTGCCTGCGT CGAGGCGAAG
ATGTACAAGC CCGAGGTGCT GGTGGAAATG ATGGTGGTGG CTGCCCTGTA A
 
Protein sequence
MSIQRLHVEK RYSEVVIHNG TVYLAGQLAD DYSGDIRQQT RETLANIDRM LAEAGSDKSK 
ILSVTIYLKD MDAHYDGLNA EYDAWVAEGA APARACVEAK MYKPEVLVEM MVVAAL