Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0227 |
Symbol | |
ID | 5106194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 232306 |
End bp | 233889 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501443 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001185733 |
Protein GI | 146305268 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTC TGACTGGCCA CAACTACATC GGTGGTGAGC GCCGCGCCGC TGGCACCACC CTGCTCGAGA GCATCGATGC CAGCAGCGGT GAAGCGCTGC CCTACGCCTT CACCCAGGCC ACGCCGGAGG AGGTCGACGC CGCCGCCCAG GCCGCCGCCG CCGCTTACCC GCTCTACCGC AACCTGTCGG CCGAGCGTCG CGCCGAATTT CTCGATGCCA TCGCCGATGA GCTCGACGCC CTGGGCGATG ACTTCGTCGC CCTGGTCACC CGCGAGACCG CACTGCCGGC TGCCCGCATC CAGGGCGAAC GTGGTCGTAC AAGTGGTCAG ATGCGTCTGT TCGCCAATGT GCTGCGTCGC GGTGATTTCT ACGGCGCGCG CATCGACCGC GCCCTGCAGG ATCGTCAGCC GCTGCCGCGT CCGGATATCC GTCAGTACCA GATCGGTGTC GGCCCGGTTG CCGTGTTCGG TGCCAGCAAC TTCCCGCTGG CCTTCTCCAC CGCCGGTGGC GATACCGCGT CGGCCCTGGC TGCCGGTTGC CCGGTGGTGT TCAAGGCGCA CAGCGGCCAT ATGGCCACTG CCGAGTGCGT AGCCGATGCG GTTATCCGCG CGGCCGAGAA AACCGGCATG CCCAAGGGCG TGTTCAACAT GATTTTCGGC GGCGGTGTCG GCGAGCTTCT GGTCAAGCAC CCGGCCATCC AGGCCGTCGG CTTCACCGGT TCGCTGAAAG GTGGTCGTGC CCTGTGCGAC ATGGCCGCTG CCCGTCCGCA GCCGATCCCG GTGTTCGCCG AGATGTCCAG CGTCAACCCG GTGATCGTCC TGCCGGGTGC CCTGAAGGCG CGTGGAGCCA CCGTGGCCAA GGAGCTGGCT GGTTCCGTGG TCCTGGGTTG TGGTCAGTTC TGCACCAATC CTGGTTTGGT CATCGGTATT CGCAGCACCG AGTTCAGCGA CTTCGTCGCA GGGCTTGGCG ATGCCATCGC CAGCCAGCCG GCGCAGACCA TGCTCAACGC CGGTACGCTG CGCAGCTACG CCAGCGGTGT GTCTCAGCTC AAGGCCCACG CCAAGGTCAC CCACCTGGCG GGCAGCGAGC AGGCCGGCAA CCAGGCGCAA CCGCAGTTGT TCAAGGCCGA CGTGAGCATG CTGCTCGAAG GCGACCACCT GCTGCAGGAA GAAGTCTTCG GCCCGACCAC CGTCGTCGTC GAAGTCGCCG ACAGCGCCGA GCTGACCCGT GCCCTGCAGA GCATGCACGG CCAGCTGACC GCGACCCTGA TCGCCGAGCG TGACGACCTC AGCGCCTTCC GCGACCTGCT GCCGCTGCTG GAGGTCAAAG CCGGCCGCGT ACTGCTCAAC GGTTACCCGA CCGGCGTGGA AGTCTGCGAT TCGATGGTCC ATGGCGGCCC GTACCCGGCG ACTTCCGACG CCCGTGGTAC CTCGGTAGGT ACCCTGGCGA TCCACCGCTT CCTGCGTCCT GTGTGCTACC AGAACTACCC GGACGAGGTA CTGCCGGAGG CGCTGCAGAA CGCCAACCCG CTGGGCATCC AGCGTCTGGT GGACGGCGTG CACAGCCGTG AAGCGCTGAG CTGA
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Protein sequence | MLSLTGHNYI GGERRAAGTT LLESIDASSG EALPYAFTQA TPEEVDAAAQ AAAAAYPLYR NLSAERRAEF LDAIADELDA LGDDFVALVT RETALPAARI QGERGRTSGQ MRLFANVLRR GDFYGARIDR ALQDRQPLPR PDIRQYQIGV GPVAVFGASN FPLAFSTAGG DTASALAAGC PVVFKAHSGH MATAECVADA VIRAAEKTGM PKGVFNMIFG GGVGELLVKH PAIQAVGFTG SLKGGRALCD MAAARPQPIP VFAEMSSVNP VIVLPGALKA RGATVAKELA GSVVLGCGQF CTNPGLVIGI RSTEFSDFVA GLGDAIASQP AQTMLNAGTL RSYASGVSQL KAHAKVTHLA GSEQAGNQAQ PQLFKADVSM LLEGDHLLQE EVFGPTTVVV EVADSAELTR ALQSMHGQLT ATLIAERDDL SAFRDLLPLL EVKAGRVLLN GYPTGVEVCD SMVHGGPYPA TSDARGTSVG TLAIHRFLRP VCYQNYPDEV LPEALQNANP LGIQRLVDGV HSREALS
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